Difference between revisions of "TSS:Hg 87976.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK294681:0 ENST00000433454.3:-36 NM_001105541:-36 uc010lue.4:-36 |chr=chr8 |cpg_percent=0.11 |distance=0 |distance_to_tss=58 |end=24915022 |entrez_id=47...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |NF-M= |
| + | |NFM= | ||
| + | |all_trans=HGNC:7734 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=13 |
|end=24915022 | |end=24915022 | ||
| + | |end_of_center_position=24915000 | ||
|entrez_id=4741 | |entrez_id=4741 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=NEF3 | + | |gene_alias=NEF3{{!}}NF-M{{!}}NFM |
|gene_description=neurofilament medium | |gene_description=neurofilament medium | ||
|gene_id=4741 | |gene_id=4741 | ||
| − | |gene_name= | + | |gene_name=neurofilament medium chain |
|gene_source=HGNC:7734 | |gene_source=HGNC:7734 | ||
|gene_symbol=NEFM | |gene_symbol=NEFM | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_005382 | |nearest_refseq=NM_005382 | ||
|nearest_unigene=Hs.458657 | |nearest_unigene=Hs.458657 | ||
| − | |num_trans= | + | |num_trans=4741 |
|species=human | |species=human | ||
|start=24914977 | |start=24914977 | ||
| + | |start_of_center_position=24914999 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK294681 | |transcript_name=AK294681 | ||
| Line 29: | Line 33: | ||
|tss_id=hg_87976.1 | |tss_id=hg_87976.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9UK51 |
}} | }} | ||
Latest revision as of 14:21, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 24914999 |
|---|---|
| End of the center position in the TSS region: | 24915000 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK294681 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4741 |
| All_trans: | HGNC:7734 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NM_001105541 |
| Entrez ID: | 4741 |
| Nearest Unigene: | Hs.458657 |
| Nearest Refseq: | NM_005382 |
| Nearest Ensembl: | ENSG00000104722 |
| Gene Name: | neurofilament medium chain |
| Gene Alias: | NEF3|NF-M|NFM |
| Gene Description: | neurofilament medium |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
