Difference between revisions of "TSS:Hg 8798.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:26802 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=-31 | |distance=-31 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-87061 |
|end=224529259 | |end=224529259 | ||
| + | |end_of_center_position=224529257 | ||
|entrez_id=149111 | |entrez_id=149111 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:26802 | |hgnc_mgi_id=HGNC:26802 | ||
|nearest_ensembl=ENSG00000143786 | |nearest_ensembl=ENSG00000143786 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_152495 |
|nearest_refseq=NM_152495 | |nearest_refseq=NM_152495 | ||
|nearest_unigene=Hs.731723 | |nearest_unigene=Hs.731723 | ||
| − | |num_trans= | + | |num_trans=149111 |
|species=human | |species=human | ||
|start=224529253 | |start=224529253 | ||
| + | |start_of_center_position=224529256 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000489556.5 | + | |transcript_name=ENST00000489556.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_8798.1 | |tss_id=hg_8798.1 | ||
Latest revision as of 14:21, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 224529256 |
|---|---|
| End of the center position in the TSS region: | 224529257 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000489556.5 |
|---|---|
| Distance: | -31 |
| Num_trans: | 149111 |
| All_trans: | HGNC:26802 |
TATA-Box annotation
| Distance to TSS: | -87061 |
|---|---|
| Nearest PromoterID: | NM_152495 |
| Entrez ID: | 149111 |
| Nearest Unigene: | Hs.731723 |
| Nearest Refseq: | NM_152495 |
| Nearest Ensembl: | ENSG00000143786 |
| Gene Name: | cornichon family AMPA receptor auxiliary protein 3 |
| Gene Alias: | CNIH-3 |
| Gene Description: | cornichon family AMPA receptor auxiliary protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
