Difference between revisions of "TSS:Hg 101948.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |GPR26= | ||
| + | |Gpcr26= | ||
| + | |LPA1= | ||
| + | |Mrec1.3= | ||
| + | |VZG1= | ||
| + | |all_trans=KJ901401:-480 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance_to_tss= | + | |distance=-480 |
| + | |distance_to_tss=95105 | ||
| + | |edg-2= | ||
| + | |end=110941680 | ||
| + | |end_of_center_position=110941675 | ||
|entrez_id=1902 | |entrez_id=1902 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=EDG2 | + | |gene_alias=EDG2{{!}}GPR26{{!}}Gpcr26{{!}}LPA1{{!}}Mrec1.3{{!}}VZG1{{!}}edg-2{{!}}rec.1.3{{!}}vzg-1 |
|gene_description=lysophosphatidic acid receptor 1 | |gene_description=lysophosphatidic acid receptor 1 | ||
|gene_name=LPAR1 | |gene_name=LPAR1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000198121 | |nearest_ensembl=ENSG00000198121 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351420 |
|nearest_refseq=NM_001401 | |nearest_refseq=NM_001401 | ||
|nearest_unigene=Hs.126667 | |nearest_unigene=Hs.126667 | ||
| + | |num_trans=1 | ||
| + | |rec.1.3= | ||
| + | |species=human | ||
| + | |start=110941669 | ||
| + | |start_of_center_position=110941674 | ||
| + | |strand=- | ||
| + | |transcript_name=KJ901401 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101948.1 | |tss_id=hg_101948.1 | ||
| + | |tss_score=1 | ||
| + | |vzg-1= | ||
}} | }} | ||
Latest revision as of 16:52, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 110941674 |
|---|---|
| End of the center position in the TSS region: | 110941675 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | KJ901401 |
|---|---|
| Distance: | -480 |
| Num_trans: | 1 |
| All_trans: | KJ901401:-480 |
TATA-Box annotation
| Distance to TSS: | 95105 |
|---|---|
| Nearest PromoterID: | NM_001351420 |
| Entrez ID: | 1902 |
| Nearest Unigene: | Hs.126667 |
| Nearest Refseq: | NM_001401 |
| Nearest Ensembl: | ENSG00000198121 |
| Gene Name: | LPAR1 |
| Gene Alias: | EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 |
| Gene Description: | lysophosphatidic acid receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
