Difference between revisions of "TSS:Hg 92910.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | | | + | |GLVR2= |
| + | |IBGC1= | ||
| + | |IBGC3= | ||
| + | |MLVAR= | ||
| + | |PIT-2= | ||
| + | |PIT2= | ||
| + | |RAM1= | ||
| + | |Ram-1= | ||
| + | |all_trans=HGNC:10947 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance=- | + | |distance=-43 |
| − | |distance_to_tss= | + | |distance_to_tss=49 |
|end=42501188 | |end=42501188 | ||
| + | |end_of_center_position=42501183 | ||
|entrez_id=6575 | |entrez_id=6575 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| − | |gene_alias=GLVR-2 | + | |gene_alias=GLVR-2{{!}}GLVR2{{!}}IBGC1{{!}}IBGC3{{!}}MLVAR{{!}}PIT-2{{!}}PIT2{{!}}RAM1{{!}}Ram-1 |
|gene_description=solute carrier family 20 member 2 | |gene_description=solute carrier family 20 member 2 | ||
|gene_id=6575 | |gene_id=6575 | ||
| Line 21: | Line 30: | ||
|nearest_refseq=NM_006749 | |nearest_refseq=NM_006749 | ||
|nearest_unigene=Hs.653173 | |nearest_unigene=Hs.653173 | ||
| − | |num_trans= | + | |num_trans=6575 |
|species=human | |species=human | ||
|start=42501176 | |start=42501176 | ||
| + | |start_of_center_position=42501182 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000520262.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_92910.1 | |tss_id=hg_92910.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A384MR38 Q08357 |
}} | }} | ||
Latest revision as of 16:06, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 42501182 |
|---|---|
| End of the center position in the TSS region: | 42501183 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000520262.6 |
|---|---|
| Distance: | -43 |
| Num_trans: | 6575 |
| All_trans: | HGNC:10947 |
TATA-Box annotation
| Distance to TSS: | 49 |
|---|---|
| Nearest PromoterID: | NM_001257180 |
| Entrez ID: | 6575 |
| Nearest Unigene: | Hs.653173 |
| Nearest Refseq: | NM_006749 |
| Nearest Ensembl: | ENSG00000168575 |
| Gene Name: | solute carrier family 20 member 2 |
| Gene Alias: | GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 |
| Gene Description: | solute carrier family 20 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
