Difference between revisions of "TSS:Hg 94817.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000518964.5:-17 uc064qcn.1:-17 NR_038447:29 NR_038446:29 ENST00000500989.2:37 uc003yry.5:37 BX648371:37 ENST00000522865.5:76 ENST00000517869.1:76...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:45133 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-32 | |distance_to_tss=-32 | ||
|end=125951232 | |end=125951232 | ||
| + | |end_of_center_position=125951229 | ||
|entrez_id=100130231 | |entrez_id=100130231 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:45133 | |hgnc_mgi_id=HGNC:45133 | ||
|nearest_ensembl=ENSG00000245164 | |nearest_ensembl=ENSG00000245164 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_038447 |
|nearest_refseq=NR_038446 | |nearest_refseq=NR_038446 | ||
|nearest_unigene=Hs.729642 | |nearest_unigene=Hs.729642 | ||
| − | |num_trans= | + | |num_trans=100130231 |
|species=human | |species=human | ||
|start=125951225 | |start=125951225 | ||
| + | |start_of_center_position=125951228 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000518964.5 | + | |transcript_name=ENST00000518964.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_94817.1 | |tss_id=hg_94817.1 | ||
Latest revision as of 16:48, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 125951228 |
|---|---|
| End of the center position in the TSS region: | 125951229 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000518964.5 |
|---|---|
| Distance: | -17 |
| Num_trans: | 100130231 |
| All_trans: | HGNC:45133 |
TATA-Box annotation
| Distance to TSS: | -32 |
|---|---|
| Nearest PromoterID: | NR_038447 |
| Entrez ID: | 100130231 |
| Nearest Unigene: | Hs.729642 |
| Nearest Refseq: | NR_038446 |
| Nearest Ensembl: | ENSG00000245164 |
| Gene Name: | long intergenic non-protein coding RNA 861 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 861 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
