Difference between revisions of "TSS:Hg 95537.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000356994.6:265 ENST00000320476.7:265 NM_182706:265 NM_015356:265 uc003yzp.1:265 uc003yzo.1:265 AY062238:265 BC146321:268 AB383767:269 D63481:270...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |SCRB1= |
| + | |SCRIB1= | ||
| + | |Vartul= | ||
| + | |all_trans=HGNC:30377 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=62 |
|end=143815779 | |end=143815779 | ||
| + | |end_of_center_position=143815712 | ||
|entrez_id=23513 | |entrez_id=23513 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=CRIB1 | + | |gene_alias=CRIB1{{!}}SCRB1{{!}}SCRIB1{{!}}Vartul |
| − | |gene_description= | + | |gene_description=scribble planar cell polarity protein |
|gene_id=23513 | |gene_id=23513 | ||
| − | |gene_name= | + | |gene_name=scribble planar cell polarity protein |
|gene_source=HGNC:30377 | |gene_source=HGNC:30377 | ||
|gene_symbol=SCRIB | |gene_symbol=SCRIB | ||
| Line 18: | Line 22: | ||
|hgnc_mgi_id=HGNC:30377 | |hgnc_mgi_id=HGNC:30377 | ||
|nearest_ensembl=ENSG00000180900 | |nearest_ensembl=ENSG00000180900 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_182706 |
|nearest_refseq=NM_015356 | |nearest_refseq=NM_015356 | ||
|nearest_unigene=Hs.436329 | |nearest_unigene=Hs.436329 | ||
| − | |num_trans= | + | |num_trans=23513 |
|species=human | |species=human | ||
|start=143815643 | |start=143815643 | ||
| + | |start_of_center_position=143815711 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000356994 | + | |transcript_name=ENST00000356994.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_95537.1 | |tss_id=hg_95537.1 | ||
Latest revision as of 17:04, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 143815711 |
|---|---|
| End of the center position in the TSS region: | 143815712 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000356994.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23513 |
| All_trans: | HGNC:30377 |
TATA-Box annotation
| Distance to TSS: | 62 |
|---|---|
| Nearest PromoterID: | NM_182706 |
| Entrez ID: | 23513 |
| Nearest Unigene: | Hs.436329 |
| Nearest Refseq: | NM_015356 |
| Nearest Ensembl: | ENSG00000180900 |
| Gene Name: | scribble planar cell polarity protein |
| Gene Alias: | CRIB1|SCRB1|SCRIB1|Vartul |
| Gene Description: | scribble planar cell polarity protein |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
