Difference between revisions of "TSS:Hg 95719.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000534781.1:494 uc064rpt.1:494 |chr=chr8 |cpg_percent=0.03 |distance=494 |distance_to_tss=611 |end=144791395 |entrez_id=102465978 |gc_percent=0.59...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:10368 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=611 | |distance_to_tss=611 | ||
|end=144791395 | |end=144791395 | ||
| + | |end_of_center_position=144791381 | ||
|entrez_id=102465978 | |entrez_id=102465978 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:10368 | |hgnc_mgi_id=HGNC:10368 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000283764 |
|nearest_promoter_id=NR_106909 | |nearest_promoter_id=NR_106909 | ||
|nearest_refseq=NR_106909 | |nearest_refseq=NR_106909 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=6132 |
|species=human | |species=human | ||
|start=144791365 | |start=144791365 | ||
| + | |start_of_center_position=144791380 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000534781 | + | |transcript_name=ENST00000534781.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_95719.1 | |tss_id=hg_95719.1 | ||
Latest revision as of 17:08, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 144791380 |
|---|---|
| End of the center position in the TSS region: | 144791381 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000534781.1 |
|---|---|
| Distance: | 494 |
| Num_trans: | 6132 |
| All_trans: | HGNC:10368 |
TATA-Box annotation
| Distance to TSS: | 611 |
|---|---|
| Nearest PromoterID: | NR_106909 |
| Entrez ID: | 102465978 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106909 |
| Nearest Ensembl: | ENSG00000283764 |
| Gene Name: | ribosomal protein L8 |
| Gene Alias: | hsa-mir-6850 |
| Gene Description: | microRNA 6850 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
