Difference between revisions of "TSS:Hg 95726.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK127225:166 |chr=chr8 |cpg_percent=0.11 |distance=166 |distance_to_tss=-304 |end=144827223 |entrez_id=7553 |gc_percent=0.78607 |gene_alias=HF.16|KOX4|z...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |KOX4= |
| + | |all_trans= | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=166 | |distance=166 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-174 |
|end=144827223 | |end=144827223 | ||
| − | |entrez_id= | + | |end_of_center_position=144827215 |
| + | |entrez_id=100130027 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=uncharacterized LOC100130027 |
|gene_id=100130027 | |gene_id=100130027 | ||
|gene_name=uncharacterized LOC100130027 | |gene_name=uncharacterized LOC100130027 | ||
| Line 15: | Line 17: | ||
|gene_symbol=LOC100130027 | |gene_symbol=LOC100130027 | ||
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_147501 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_147501 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.639618 |
| − | |num_trans= | + | |num_trans=100130027 |
|species=human | |species=human | ||
|start=144827205 | |start=144827205 | ||
| + | |start_of_center_position=144827214 | ||
|strand=- | |strand=- | ||
|transcript_name=AK127225 | |transcript_name=AK127225 | ||
| Line 30: | Line 33: | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
| + | |zf30= | ||
}} | }} | ||
Latest revision as of 17:08, 22 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 144827214 |
|---|---|
| End of the center position in the TSS region: | 144827215 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK127225 |
|---|---|
| Distance: | 166 |
| Num_trans: | 100130027 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -174 |
|---|---|
| Nearest PromoterID: | NR_147501 |
| Entrez ID: | 100130027 |
| Nearest Unigene: | Hs.639618 |
| Nearest Refseq: | NR_147501 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100130027 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130027 |
| Gene Type: | ncRNA |
| CpG%: | 0.11 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
