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Difference between revisions of "TSS:Hg 96304.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000455933.6:14 uc010mix.2:14 EU741058:14 ENST00000582301.5:-159 ENST00000584816.5:-159 ENST00000584020.5:-159 ENST00000577551.5:-159 ENST000005846...")
 
 
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{{TSSDetail
 
{{TSSDetail
−
|all_trans=ENST00000455933.6:14 uc010mix.2:14 EU741058:14 ENST00000582301.5:-159 ENST00000584816.5:-159 ENST00000584020.5:-159 ENST00000577551.5:-159 ENST00000584637.5:-159 ENST00000581051.5:-159 ENST00000582072.5:-159 uc022bee.2:-159 uc022beg.2:-159 uc022ben.2:-159 uc022bem.2:-159 uc022bei.2:-159 uc022beh.2:-159 uc022bej.2:-159 GQ495924:-159 GQ495918:-159 GQ495919:-159 GQ495920:-159 GQ495921:-159 GQ495922:-159 GQ495923:-159 ENST00000584351.5:-270 ENST00000583719.5:-270 ENST00000580467.5:-270 ENST00000585267.5:-270 ENST00000580576.5:-270 ENST00000428597.5:-270 NR_047543:-270 NR_047542:-270 NR_047541:-270 NR_047540:-270 NR_047539:-270 NR_047538:-270 NR_047537:-270 NR_047536:-270 NR_047535:-270 NR_003529:-270 NR_047533:-270 NR_047534:-270 NR_047532:-270 NR_120536:-270 uc022bed.1:-270 uc022bef.1:-270 uc010miw.1:-270 uc022bel.2:-270 uc022bek.2:-270 uc003zpm.4:-270 DQ485454:-270 GQ422823:-270 GQ495926:-270 GQ495925:-270 AB548314:-270 DQ485453:-270 ENST00000468603.6:-283 uc064skl.1:-283 ENST00000578935.1:401 uc064skm.1:401
+
|CDKN2B-AS=
 +
|CDKN2BAS=
 +
|NCRNA00089=
 +
|PCAT12=
 +
|all_trans=HGNC:34341
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.09
 
|cpg_percent=0.09
 
|distance=14
 
|distance=14
−
|distance_to_tss=280
+
|distance_to_tss=253
 
|end=21995081
 
|end=21995081
−
|entrez_id=100048912
+
|end_of_center_position=21995071
 +
|entrez_id=1029
 
|gc_percent=0.567164
 
|gc_percent=0.567164
−
|gene_alias=ANRIL|CDKN2B-AS|CDKN2BAS|NCRNA00089|PCAT12|p15AS
+
|gene_alias=ARF{{!}}CDK4I{{!}}CDKN2{{!}}CMM2{{!}}INK4{{!}}INK4A{{!}}MLM{{!}}MTS-1{{!}}MTS1{{!}}P14{{!}}P14ARF{{!}}P16{{!}}P16-INK4A{{!}}P16INK4{{!}}P16INK4A{{!}}P19{{!}}P19ARF{{!}}TP16
−
|gene_description=CDKN2B antisense RNA 1
+
|gene_description=cyclin dependent kinase inhibitor 2A
 
|gene_id=100048912
 
|gene_id=100048912
 
|gene_name=CDKN2B antisense RNA 1
 
|gene_name=CDKN2B antisense RNA 1
 
|gene_source=HGNC:34341
 
|gene_source=HGNC:34341
 
|gene_symbol=CDKN2B-AS1
 
|gene_symbol=CDKN2B-AS1
−
|gene_synonyms=ANRIL CDKN2B-AS CDKN2BAS NCRNA00089 PCAT12 RP11-145E5.4 p15AS
+
|gene_synonyms=ANRIL CDKN2B-AS NCRNA00089 PCAT12 RP11-145E5.4 p15AS
−
|gene_type=ncRNA
+
|gene_type=protein-coding
 
|hgnc_mgi_id=HGNC:34341
 
|hgnc_mgi_id=HGNC:34341
−
|nearest_ensembl=ENSG00000240498
+
|nearest_ensembl=ENSG00000147889
−
|nearest_promoter_id=NR_003529
+
|nearest_promoter_id=NM_001363763
−
|nearest_refseq=NR_003529
+
|nearest_refseq=NM_000077
−
|nearest_unigene=Hs.493614
+
|nearest_unigene=Hs.512599
−
|num_trans=60
+
|num_trans=100048912
 +
|p15AS=
 
|species=human
 
|species=human
 
|start=21995060
 
|start=21995060
 +
|start_of_center_position=21995070
 
|strand=+
 
|strand=+
−
|transcript_name=ENST00000455933.6 uc010mix.2 EU741058
+
|transcript_name=ENST00000421632.2 EU741058
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_96304.1
 
|tss_id=hg_96304.1

Latest revision as of 17:21, 22 July 2021

Basic information about the TSS

TSS ID:hg_96304.1
Species:human
Chr:chr9
TSS Classification:yes
Start:21995060
End:21995081
Strand:+
TSS Score:1
Start of the center position in the TSS region:21995070
End of the center position in the TSS region:21995071



Gene and protein annotation

Transcript_name:ENST00000421632.2 EU741058
Distance:14
GeneID:100048912
HGNC/MGI_ID:HGNC:34341
UniProt_ID:
Gene_name:CDKN2B antisense RNA 1
Gene_symbol:CDKN2B-AS1
Gene_synonyms:ANRIL CDKN2B-AS NCRNA00089 PCAT12 RP11-145E5.4 p15AS
Gene_source:HGNC:34341



Transcript annotation

Transcript_name:ENST00000421632.2 EU741058
Distance:14
Num_trans:100048912
All_trans:HGNC:34341



TATA-Box annotation

Distance to TSS:253
Nearest PromoterID:NM_001363763
Entrez ID:1029
Nearest Unigene:Hs.512599
Nearest Refseq:NM_000077
Nearest Ensembl:ENSG00000147889
Gene Name:CDKN2B antisense RNA 1
Gene Alias:ARF|CDK4I|CDKN2|CMM2|INK4|INK4A|MLM|MTS-1|MTS1|P14|P14ARF|P16|P16-INK4A|P16INK4|P16INK4A|P19|P19ARF|TP16
Gene Description:cyclin dependent kinase inhibitor 2A
Gene Type:protein-coding
CpG%:0.09
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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