Difference between revisions of "TSS:Hg 101991.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |HTPCRH06= | ||
| + | |OR2AN1P= | ||
| + | |OR2AR1P= | ||
| + | |all_trans=LF354930:37 MA590507:37 LF354929:103 MA590506:103 LF354928:195 MA590505:195 AF052139:273 | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss=- | + | |distance=37 |
| + | |distance_to_tss=-31951 | ||
| + | |end=111362176 | ||
| + | |end_of_center_position=111362176 | ||
|entrez_id=26248 | |entrez_id=26248 | ||
|gc_percent=0.323383 | |gc_percent=0.323383 | ||
| − | |gene_alias=HSHTPCRH06 | + | |gene_alias=HSHTPCRH06{{!}}HTPCRH06{{!}}OR2AN1P{{!}}OR2AR1P |
|gene_description=olfactory receptor family 2 subfamily K member 2 | |gene_description=olfactory receptor family 2 subfamily K member 2 | ||
| + | |gene_id=23392 | ||
|gene_name=OR2K2 | |gene_name=OR2K2 | ||
| + | |gene_source=HGNC:29020 | ||
| + | |gene_symbol=KIAA0368 | ||
| + | |gene_synonyms=ECM29 FLJ22036 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29020 | ||
|nearest_ensembl=ENSG00000171133 | |nearest_ensembl=ENSG00000171133 | ||
|nearest_promoter_id=NM_205859 | |nearest_promoter_id=NM_205859 | ||
|nearest_refseq=NM_205859 | |nearest_refseq=NM_205859 | ||
|nearest_unigene=Hs.381312 | |nearest_unigene=Hs.381312 | ||
| − | |tata_box= | + | |num_trans=7 |
| + | |species=human | ||
| + | |start=111362174 | ||
| + | |start_of_center_position=111362175 | ||
| + | |strand=- | ||
| + | |tata_box=-76(TGTTCTATAAGG,-,0.00) | ||
| + | |transcript_name=LF354930 MA590507 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101991.1 | |tss_id=hg_101991.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 16:53, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111362175 |
|---|---|
| End of the center position in the TSS region: | 111362176 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF354930 MA590507 |
|---|---|
| Distance: | 37 |
| Num_trans: | 7 |
| All_trans: | LF354930:37 MA590507:37 LF354929:103 MA590506:103 LF354928:195 MA590505:195 AF052139:273 |
TATA-Box annotation
| Distance to TSS: | -31951 |
|---|---|
| Nearest PromoterID: | NM_205859 |
| Entrez ID: | 26248 |
| Nearest Unigene: | Hs.381312 |
| Nearest Refseq: | NM_205859 |
| Nearest Ensembl: | ENSG00000171133 |
| Gene Name: | OR2K2 |
| Gene Alias: | HSHTPCRH06|HTPCRH06|OR2AN1P|OR2AR1P |
| Gene Description: | olfactory receptor family 2 subfamily K member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.323383 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -76(TGTTCTATAAGG,-,0.00) |
