Difference between revisions of "TSS:Hg 101998.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=40297 |entrez_id=23392 |gc_percent=0.393035 |gene_alias=ECM29 |gene_description=KIAA0368 |gene_name=KIAA0368 |gene_type=protein-...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=39114 | ||
| + | |end=111444455 | ||
| + | |end_of_center_position=111444449 | ||
|entrez_id=23392 | |entrez_id=23392 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=ECM29 | + | |gene_alias=ECM29{{!}}KIAA0368 |
| − | |gene_description= | + | |gene_description=Ecm29 proteasome adaptor and scaffold |
| − | |gene_name= | + | |gene_name=ECPAS |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000136813 | |nearest_ensembl=ENSG00000136813 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001364930 |
|nearest_refseq=NM_001080398 | |nearest_refseq=NM_001080398 | ||
|nearest_unigene=Hs.368255 | |nearest_unigene=Hs.368255 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=111444441 | ||
| + | |start_of_center_position=111444448 | ||
| + | |strand=- | ||
| + | |tata_box=-17(ACGTATAAAAAG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101998.1 | |tss_id=hg_101998.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:53, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111444448 |
|---|---|
| End of the center position in the TSS region: | 111444449 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 39114 |
|---|---|
| Nearest PromoterID: | NM_001364930 |
| Entrez ID: | 23392 |
| Nearest Unigene: | Hs.368255 |
| Nearest Refseq: | NM_001080398 |
| Nearest Ensembl: | ENSG00000136813 |
| Gene Name: | ECPAS |
| Gene Alias: | ECM29|KIAA0368 |
| Gene Description: | Ecm29 proteasome adaptor and scaffold |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -17(ACGTATAAAAAG,-,0.00) |
