Personal tools

Difference between revisions of "TSS:Hg 100163.1"

From referenceTSS

Jump to: navigation, search
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=BC000524:-41 BC009427:-42 M20020:-43 J03537:-43 CU693282:-43 DQ891744:-43 KJ897500:-43 KJ897501:-43 DQ895025:-43 KJ905910:-43 AB529028:-43
+
|all_trans=HGNC:10429
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.03
 
|cpg_percent=0.03
 
|distance=-41
 
|distance=-41
|distance_to_tss=676
+
|distance_to_tss=675
 
|end=19379577
 
|end=19379577
 +
|end_of_center_position=19379562
 
|entrez_id=6194
 
|entrez_id=6194
 
|gc_percent=0.442786
 
|gc_percent=0.442786
Line 21: Line 22:
 
|nearest_refseq=NM_001010
 
|nearest_refseq=NM_001010
 
|nearest_unigene=Hs.408073
 
|nearest_unigene=Hs.408073
|num_trans=11
+
|num_trans=6194
 
|species=human
 
|species=human
 
|start=19379545
 
|start=19379545
 +
|start_of_center_position=19379561
 
|strand=-
 
|strand=-
 
|transcript_name=BC000524
 
|transcript_name=BC000524

Latest revision as of 17:37, 19 July 2021

Basic information about the TSS


TSS ID:hg_100163.1
Species:human
Chr:chr9
TSS Classification:yes
Start:19379545
End:19379577
Strand:-
TSS Score:1
Start of the center position in the TSS region:19379561
End of the center position in the TSS region:19379562



Gene and protein annotation


Transcript_name:BC000524
Distance:-41
GeneID:6194
HGNC/MGI_ID:HGNC:10429
UniProt_ID:
Gene_name:ribosomal protein S6
Gene_symbol:RPS6
Gene_synonyms:S6
Gene_source:HGNC:10429



Transcript annotation


Transcript_name:BC000524
Distance:-41
Num_trans:6194
All_trans:HGNC:10429



TATA-Box annotation


Distance to TSS:675
Nearest PromoterID:NM_001010
Entrez ID:6194
Nearest Unigene:Hs.408073
Nearest Refseq:NM_001010
Nearest Ensembl:ENSG00000137154
Gene Name:ribosomal protein S6
Gene Alias:S6
Gene Description:ribosomal protein S6
Gene Type:protein-coding
CpG%:0.03
GC%:0.442786
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):