Difference between revisions of "TSS:Mm 100026.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Clm8= |
| + | |LMIR1= | ||
| + | |MAIR-I= | ||
| + | |MAIR-Ia= | ||
| + | |MMAC8= | ||
| + | |Pigr4= | ||
| + | |all_trans=MGI:3649375 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=18250 | |distance_to_tss=18250 | ||
|end=114908312 | |end=114908312 | ||
| + | |end_of_center_position=114908291 | ||
|entrez_id=217303 | |entrez_id=217303 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=B230315M08Rik | + | |gene_alias=B230315M08Rik{{!}}Clm8{{!}}LMIR1{{!}}MAIR-1{{!}}MAIR-I{{!}}MAIR-Ia{{!}}MMAC8{{!}}Pigr4{{!}}mcpir1 |
|gene_description=CD300A molecule | |gene_description=CD300A molecule | ||
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=basic transcription factor 3, pseudogene 13 |
|gene_source=MGI:3649375 | |gene_source=MGI:3649375 | ||
| − | |gene_symbol= | + | |gene_symbol=Btf3-ps13 |
| − | |gene_synonyms= | + | |gene_synonyms=Gm11698 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3649375 | |hgnc_mgi_id=MGI:3649375 | ||
| + | |mcpir1= | ||
|nearest_ensembl=ENSMUSG00000034652 | |nearest_ensembl=ENSMUSG00000034652 | ||
|nearest_promoter_id=NM_170758 | |nearest_promoter_id=NM_170758 | ||
|nearest_refseq=NM_170758 | |nearest_refseq=NM_170758 | ||
|nearest_unigene=Mm.294439 | |nearest_unigene=Mm.294439 | ||
| − | |num_trans= | + | |num_trans= |
|species=mouse | |species=mouse | ||
|start=114908269 | |start=114908269 | ||
| + | |start_of_center_position=114908290 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000117948.1 | |transcript_name=ENSMUST00000117948.1 | ||
Latest revision as of 10:29, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114908290 |
|---|---|
| End of the center position in the TSS region: | 114908291 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000117948.1 |
|---|---|
| Distance: | 419 |
| Num_trans: | |
| All_trans: | MGI:3649375 |
TATA-Box annotation
| Distance to TSS: | 18250 |
|---|---|
| Nearest PromoterID: | NM_170758 |
| Entrez ID: | 217303 |
| Nearest Unigene: | Mm.294439 |
| Nearest Refseq: | NM_170758 |
| Nearest Ensembl: | ENSMUSG00000034652 |
| Gene Name: | basic transcription factor 3, pseudogene 13 |
| Gene Alias: | B230315M08Rik|Clm8|LMIR1|MAIR-1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 |
| Gene Description: | CD300A molecule |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
