Difference between revisions of "TSS:Mm 100046.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000021077.3:0 NM_012030:0 uc007mgp.1:0 AK085210:0 AK168894:0 AK153558:0 BC085141:8 U74079:55 BC038656:121 |chr=chr11 |cpg_percent=0.105 |distan...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |NHE-RF= |
| + | |NHERF-1= | ||
| + | |NHERF1= | ||
| + | |all_trans=MGI:1349482 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=0 | |distance_to_tss=0 | ||
|end=115163348 | |end=115163348 | ||
| + | |end_of_center_position=115163341 | ||
|entrez_id=26941 | |entrez_id=26941 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=EBP-50 | + | |gene_alias=EBP-50{{!}}NHE-RF{{!}}NHERF-1{{!}}NHERF1 |
| − | |gene_description= | + | |gene_description=solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 |
|gene_id=26941 | |gene_id=26941 | ||
| − | |gene_name= | + | |gene_name=solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 |
|gene_source=MGI:1349482 | |gene_source=MGI:1349482 | ||
|gene_symbol=Slc9a3r1 | |gene_symbol=Slc9a3r1 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_012030 | |nearest_refseq=NM_012030 | ||
|nearest_unigene=Mm.27842 | |nearest_unigene=Mm.27842 | ||
| − | |num_trans= | + | |num_trans=26941 |
|species=mouse | |species=mouse | ||
|start=115163333 | |start=115163333 | ||
| + | |start_of_center_position=115163340 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000021077.3 | + | |transcript_name=ENSMUST00000021077.3 AK085210 AK168894 AK153558 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100046.1 | |tss_id=mm_100046.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q3TG37 |
}} | }} | ||
Latest revision as of 10:29, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115163340 |
|---|---|
| End of the center position in the TSS region: | 115163341 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000021077.3 AK085210 AK168894 AK153558 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26941 |
| All_trans: | MGI:1349482 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_012030 |
| Entrez ID: | 26941 |
| Nearest Unigene: | Mm.27842 |
| Nearest Refseq: | NM_012030 |
| Nearest Ensembl: | ENSMUSG00000020733 |
| Gene Name: | solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 |
| Gene Alias: | EBP-50|NHE-RF|NHERF-1|NHERF1 |
| Gene Description: | solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
