Difference between revisions of "TSS:Mm 100059.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000055490.8:10 NM_172801:10 uc007mhb.1:10 AK028866:10 |chr=chr11 |cpg_percent=0.02 |distance=10 |distance_to_tss=-14 |end=115307153 |entrez_id=...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2388365 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-14 | |distance_to_tss=-14 | ||
|end=115307153 | |end=115307153 | ||
| + | |end_of_center_position=115307149 | ||
|entrez_id=237987 | |entrez_id=237987 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_172801 | |nearest_refseq=NM_172801 | ||
|nearest_unigene=Mm.44542 | |nearest_unigene=Mm.44542 | ||
| − | |num_trans= | + | |num_trans=237987 |
|species=mouse | |species=mouse | ||
|start=115307144 | |start=115307144 | ||
| + | |start_of_center_position=115307148 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000055490.8 | + | |transcript_name=ENSMUST00000055490.8 AK028866 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100059.1 | |tss_id=mm_100059.1 | ||
Latest revision as of 10:30, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115307148 |
|---|---|
| End of the center position in the TSS region: | 115307149 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000055490.8 AK028866 |
|---|---|
| Distance: | 10 |
| Num_trans: | 237987 |
| All_trans: | MGI:2388365 |
TATA-Box annotation
| Distance to TSS: | -14 |
|---|---|
| Nearest PromoterID: | NM_172801 |
| Entrez ID: | 237987 |
| Nearest Unigene: | Mm.44542 |
| Nearest Refseq: | NM_172801 |
| Nearest Ensembl: | ENSMUSG00000050201 |
| Gene Name: | otopetrin 2 |
| Gene Alias: | 4732464P15 |
| Gene Description: | otopetrin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
