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Difference between revisions of "TSS:Mm 100063.1"

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(Created page with "{{TSSDetail |all_trans=BC145613:0 BC150803:0 AK043266:-10 AB087505:-10 BC165953:32 ENSMUST00000019006.4:-55 NM_027132:-55 uc007mhe.1:-55 uc007mhf.1:-55 ENSMUST00000106543.7:-5...")
 
 
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{{TSSDetail
 
{{TSSDetail
|all_trans=BC145613:0 BC150803:0 AK043266:-10 AB087505:-10 BC165953:32 ENSMUST00000019006.4:-55 NM_027132:-55 uc007mhe.1:-55 uc007mhf.1:-55 ENSMUST00000106543.7:-58
+
|all_trans=MGI:1916852
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 6: Line 6:
 
|distance_to_tss=85
 
|distance_to_tss=85
 
|end=115334849
 
|end=115334849
 +
|end_of_center_position=115334819
 
|entrez_id=69602
 
|entrez_id=69602
 
|gc_percent=0.621891
 
|gc_percent=0.621891
Line 21: Line 22:
 
|nearest_refseq=NM_027132
 
|nearest_refseq=NM_027132
 
|nearest_unigene=Mm.101844
 
|nearest_unigene=Mm.101844
|num_trans=10
+
|num_trans=69602
 
|species=mouse
 
|species=mouse
 
|start=115334788
 
|start=115334788
 +
|start_of_center_position=115334818
 
|strand=+
 
|strand=+
 
|transcript_name=BC145613 BC150803
 
|transcript_name=BC145613 BC150803

Latest revision as of 10:30, 26 July 2021

Basic information about the TSS


TSS ID:mm_100063.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:115334788
End:115334849
Strand:+
TSS Score:1
Start of the center position in the TSS region:115334818
End of the center position in the TSS region:115334819



Gene and protein annotation


Transcript_name:BC145613 BC150803
Distance:0
GeneID:69602
HGNC/MGI_ID:MGI:1916852
UniProt_ID:B7ZP39
Gene_name:otopetrin 3
Gene_symbol:Otop3
Gene_synonyms:2310011E08Rik
Gene_source:MGI:1916852



Transcript annotation


Transcript_name:BC145613 BC150803
Distance:0
Num_trans:69602
All_trans:MGI:1916852



TATA-Box annotation


Distance to TSS:85
Nearest PromoterID:NM_027132
Entrez ID:69602
Nearest Unigene:Mm.101844
Nearest Refseq:NM_027132
Nearest Ensembl:ENSMUSG00000018862
Gene Name:otopetrin 3
Gene Alias:2310011E08Rik
Gene Description:otopetrin 3
Gene Type:protein-coding
CpG%:0.08
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):