Difference between revisions of "TSS:Mm 100071.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000106533.7:0 AK046534:0 BC095988:3 ENSMUST00000103035.9:-11 AK009318:-11 NM_183285:-13 uc007mhn.2:-13 ENSMUST00000123345.1:18 ENSMUST000001438...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1917632 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=25 | |distance_to_tss=25 | ||
|end=115420164 | |end=115420164 | ||
| + | |end_of_center_position=115420152 | ||
|entrez_id=70382 | |entrez_id=70382 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_183285 | |nearest_refseq=NM_183285 | ||
|nearest_unigene=Mm.276299 | |nearest_unigene=Mm.276299 | ||
| − | |num_trans= | + | |num_trans=70382 |
|species=mouse | |species=mouse | ||
|start=115420138 | |start=115420138 | ||
| + | |start_of_center_position=115420151 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000106533.7 | + | |transcript_name=ENSMUST00000106533.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100071.1 | |tss_id=mm_100071.1 | ||
Latest revision as of 10:30, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115420151 |
|---|---|
| End of the center position in the TSS region: | 115420152 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000106533.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 70382 |
| All_trans: | MGI:1917632 |
TATA-Box annotation
| Distance to TSS: | 25 |
|---|---|
| Nearest PromoterID: | NM_183285 |
| Entrez ID: | 70382 |
| Nearest Unigene: | Mm.276299 |
| Nearest Refseq: | NM_183285 |
| Nearest Ensembl: | ENSMUSG00000016940 |
| Gene Name: | potassium channel tetramerisation domain containing 2 |
| Gene Alias: | 2310012I15Rik |
| Gene Description: | potassium channel tetramerisation domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
