Difference between revisions of "TSS:Mm 100097.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK133413:-472 |chr=chr11 |cpg_percent=0.02 |distance=-472 |distance_to_tss=-524 |end=115613500 |entrez_id=69674 |gc_percent=0.517413 |gene_alias=1110014...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |2310075G12Rik= | ||
|all_trans=AK133413:-472 | |all_trans=AK133413:-472 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-524 | |distance_to_tss=-524 | ||
|end=115613500 | |end=115613500 | ||
| + | |end_of_center_position=115613493 | ||
|entrez_id=69674 | |entrez_id=69674 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=1110014L05Rik | + | |gene_alias=1110014L05Rik{{!}}2310075G12Rik |
|gene_description=MIF4G domain containing | |gene_description=MIF4G domain containing | ||
|gene_name=Mif4gd | |gene_name=Mif4gd | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000020743 | |nearest_ensembl=ENSMUSG00000020743 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001243584 |
|nearest_refseq=NM_027162 | |nearest_refseq=NM_027162 | ||
|nearest_unigene=Mm.390387 | |nearest_unigene=Mm.390387 | ||
| Line 19: | Line 21: | ||
|species=mouse | |species=mouse | ||
|start=115613485 | |start=115613485 | ||
| + | |start_of_center_position=115613492 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=11(GCCTAAAAAGGC,+,0.00) |
|transcript_name=AK133413 | |transcript_name=AK133413 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 16:09, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 115613492 |
|---|---|
| End of the center position in the TSS region: | 115613493 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK133413 |
|---|---|
| Distance: | -472 |
| Num_trans: | 1 |
| All_trans: | AK133413:-472 |
TATA-Box annotation
| Distance to TSS: | -524 |
|---|---|
| Nearest PromoterID: | NM_001243584 |
| Entrez ID: | 69674 |
| Nearest Unigene: | Mm.390387 |
| Nearest Refseq: | NM_027162 |
| Nearest Ensembl: | ENSMUSG00000020743 |
| Gene Name: | Mif4gd |
| Gene Alias: | 1110014L05Rik|2310075G12Rik |
| Gene Description: | MIF4G domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 11(GCCTAAAAAGGC,+,0.00) |
