Difference between revisions of "TSS:Mm 100887.1"
From referenceTSS
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|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=36515 | |distance_to_tss=36515 | ||
|end=6029249 | |end=6029249 | ||
| + | |end_of_center_position=6029233 | ||
|entrez_id=12323 | |entrez_id=12323 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
|gene_alias=CaMKII | |gene_alias=CaMKII | ||
| − | |gene_description= | + | |gene_description=calcium/calmodulin-dependent protein kinase II, beta |
|gene_name=Camk2b | |gene_name=Camk2b | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000057897 | |nearest_ensembl=ENSMUSG00000057897 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_007595 |
|nearest_refseq=NM_007595 | |nearest_refseq=NM_007595 | ||
|nearest_unigene=Mm.439733 | |nearest_unigene=Mm.439733 | ||
| Line 18: | Line 19: | ||
|species=mouse | |species=mouse | ||
|start=6029216 | |start=6029216 | ||
| + | |start_of_center_position=6029232 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=39(CCCTCTTAAAGC,-,0.00),40(CCTCTTAAAGCT,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:27, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6029232 |
|---|---|
| End of the center position in the TSS region: | 6029233 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 36515 |
|---|---|
| Nearest PromoterID: | NM_007595 |
| Entrez ID: | 12323 |
| Nearest Unigene: | Mm.439733 |
| Nearest Refseq: | NM_007595 |
| Nearest Ensembl: | ENSMUSG00000057897 |
| Gene Name: | Camk2b |
| Gene Alias: | CaMKII |
| Gene Description: | calcium/calmodulin-dependent protein kinase II, beta |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 39(CCCTCTTAAAGC,-,0.00),40(CCTCTTAAAGCT,+,0.00) |
