Difference between revisions of "TSS:Mm 101072.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.005 |distance= |distance_to_tss=30188 |end=11519457 |entrez_id=73862 |gc_percent=0.38806 |gene_alias=- |gene_description=RIKEN cDNA 49304...") |
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|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=30188 | |distance_to_tss=30188 | ||
|end=11519457 | |end=11519457 | ||
| + | |end_of_center_position=11519454 | ||
|entrez_id=73862 | |entrez_id=73862 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| − | |gene_alias= | + | |gene_alias=4930415F15Rik |
| − | |gene_description= | + | |gene_description=spermatogenesis associated 48 |
| − | |gene_name= | + | |gene_name=Spata48 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000020191 | |nearest_ensembl=ENSMUSG00000020191 | ||
| Line 18: | Line 19: | ||
|species=mouse | |species=mouse | ||
|start=11519450 | |start=11519450 | ||
| + | |start_of_center_position=11519453 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:32, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 11519453 |
|---|---|
| End of the center position in the TSS region: | 11519454 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 30188 |
|---|---|
| Nearest PromoterID: | NM_028669 |
| Entrez ID: | 73862 |
| Nearest Unigene: | Mm.159077 |
| Nearest Refseq: | NM_028669 |
| Nearest Ensembl: | ENSMUSG00000020191 |
| Gene Name: | Spata48 |
| Gene Alias: | 4930415F15Rik |
| Gene Description: | spermatogenesis associated 48 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
