Difference between revisions of "TSS:Mm 101530.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |NO38= |
| + | |Npm= | ||
| + | |all_trans=MGI:106184 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=126 | |distance_to_tss=126 | ||
|end=33163087 | |end=33163087 | ||
| + | |end_of_center_position=33163080 | ||
|entrez_id=18148 | |entrez_id=18148 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=B23 | + | |gene_alias=B23{{!}}NO38{{!}}Npm |
|gene_description=nucleophosmin 1 | |gene_description=nucleophosmin 1 | ||
|gene_id=18148 | |gene_id=18148 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=MGI:106184 | |hgnc_mgi_id=MGI:106184 | ||
|nearest_ensembl=ENSMUSG00000057113 | |nearest_ensembl=ENSMUSG00000057113 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001252260 |
|nearest_refseq=NM_008722 | |nearest_refseq=NM_008722 | ||
|nearest_unigene=Mm.485384 | |nearest_unigene=Mm.485384 | ||
| − | |num_trans= | + | |num_trans=18148 |
|species=mouse | |species=mouse | ||
|start=33163072 | |start=33163072 | ||
| + | |start_of_center_position=33163079 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000109354.9 ENSMUST00000101375.4 GU214027 AK145124 AK153901 AK028253 AK135517 AK145813 BC089546 AK165860 AK088923 AK005420 AK005498 AK150164 | |transcript_name=ENSMUST00000109354.9 ENSMUST00000101375.4 GU214027 AK145124 AK153901 AK028253 AK135517 AK145813 BC089546 AK165860 AK088923 AK005420 AK005498 AK150164 | ||
Latest revision as of 11:02, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33163079 |
|---|---|
| End of the center position in the TSS region: | 33163080 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000109354.9 ENSMUST00000101375.4 GU214027 AK145124 AK153901 AK028253 AK135517 AK145813 BC089546 AK165860 AK088923 AK005420 AK005498 AK150164 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18148 |
| All_trans: | MGI:106184 |
TATA-Box annotation
| Distance to TSS: | 126 |
|---|---|
| Nearest PromoterID: | NM_001252260 |
| Entrez ID: | 18148 |
| Nearest Unigene: | Mm.485384 |
| Nearest Refseq: | NM_008722 |
| Nearest Ensembl: | ENSMUSG00000057113 |
| Gene Name: | nucleophosmin 1 |
| Gene Alias: | B23|NO38|Npm |
| Gene Description: | nucleophosmin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
