Difference between revisions of "TSS:Mm 101565.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |BB161688= | ||
| + | |SLP-76= | ||
| + | |SLP76= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=-5183 |
|end=34103743 | |end=34103743 | ||
| − | |entrez_id= | + | |end_of_center_position=34103737 |
| + | |entrez_id=76874 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=RIKEN cDNA 4930469K13 gene |
| − | |gene_name= | + | |gene_name=4930469K13Rik |
| − | |gene_type= | + | |gene_type=ncRNA |
| − | |nearest_ensembl= | + | |m1Khoe= |
| − | |nearest_promoter_id= | + | |nearest_ensembl= |
| − | |nearest_refseq= | + | |nearest_promoter_id=NR_155520 |
| − | |nearest_unigene=Mm. | + | |nearest_refseq=NR_155520 |
| + | |nearest_unigene=Mm.437529 | ||
|num_trans=0 | |num_trans=0 | ||
|species=mouse | |species=mouse | ||
|start=34103730 | |start=34103730 | ||
| + | |start_of_center_position=34103736 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
| Line 23: | Line 29: | ||
|tss_id=mm_101565.1 | |tss_id=mm_101565.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |twm= | ||
}} | }} | ||
Latest revision as of 16:43, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 34103736 |
|---|---|
| End of the center position in the TSS region: | 34103737 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -5183 |
|---|---|
| Nearest PromoterID: | NR_155520 |
| Entrez ID: | 76874 |
| Nearest Unigene: | Mm.437529 |
| Nearest Refseq: | NR_155520 |
| Nearest Ensembl: | |
| Gene Name: | 4930469K13Rik |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 4930469K13 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
