Difference between revisions of "TSS:Hg 10035.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:16005 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
|end=6419926 | |end=6419926 | ||
| + | |end_of_center_position=6419918 | ||
|entrez_id=54626 | |entrez_id=54626 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_019089 | |nearest_refseq=NM_019089 | ||
|nearest_unigene=Hs.118727 | |nearest_unigene=Hs.118727 | ||
| − | |num_trans= | + | |num_trans=54626 |
|species=human | |species=human | ||
|start=6419908 | |start=6419908 | ||
| + | |start_of_center_position=6419917 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-35(CTCCCTTAAAGC,-,0.00) |
| − | |transcript_name=ENST00000377834.8 ENST00000489730 | + | |transcript_name=ENST00000377834.8 ENST00000489730.1 AK091122 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10035.1 | |tss_id=hg_10035.1 | ||
Latest revision as of 17:41, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6419917 |
|---|---|
| End of the center position in the TSS region: | 6419918 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000377834.8 ENST00000489730.1 AK091122 |
|---|---|
| Distance: | 0 |
| Num_trans: | 54626 |
| All_trans: | HGNC:16005 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_019089 |
| Entrez ID: | 54626 |
| Nearest Unigene: | Hs.118727 |
| Nearest Refseq: | NM_019089 |
| Nearest Ensembl: | ENSG00000069812 |
| Gene Name: | hes family bHLH transcription factor 2 |
| Gene Alias: | bHLHb40 |
| Gene Description: | hes family bHLH transcription factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CTCCCTTAAAGC,-,0.00) |
