Difference between revisions of "TSS:Hg 102072.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:31438 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance_to_tss=- | + | |distance=0 |
| + | |distance_to_tss=-129 | ||
| + | |end=112486726 | ||
| + | |end_of_center_position=112486698 | ||
|entrez_id=158405 | |entrez_id=158405 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=KIAA1958 | |gene_description=KIAA1958 | ||
| − | |gene_name= | + | |gene_id=100133204 |
| + | |gene_name=HSDL2 antisense RNA 1 | ||
| + | |gene_source=HGNC:31438 | ||
| + | |gene_symbol=HSDL2-AS1 | ||
| + | |gene_synonyms=bA32M23.3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31438 | ||
|nearest_ensembl=ENSG00000165185 | |nearest_ensembl=ENSG00000165185 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001287038 |
|nearest_refseq=NM_133465 | |nearest_refseq=NM_133465 | ||
|nearest_unigene=Hs.656619 | |nearest_unigene=Hs.656619 | ||
| + | |num_trans=100133204 | ||
| + | |species=human | ||
| + | |start=112486669 | ||
| + | |start_of_center_position=112486697 | ||
| + | |strand=- | ||
| + | |transcript_name=AK131020 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102072.1 | |tss_id=hg_102072.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:19, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 112486697 |
|---|---|
| End of the center position in the TSS region: | 112486698 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK131020 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100133204 |
| All_trans: | HGNC:31438 |
TATA-Box annotation
| Distance to TSS: | -129 |
|---|---|
| Nearest PromoterID: | NM_001287038 |
| Entrez ID: | 158405 |
| Nearest Unigene: | Hs.656619 |
| Nearest Refseq: | NM_133465 |
| Nearest Ensembl: | ENSG00000165185 |
| Gene Name: | HSDL2 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | KIAA1958 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
