Difference between revisions of "TSS:Hg 100767.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=MG828752:-15 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=-15 |
| − | |distance_to_tss=- | + | |distance_to_tss=-157801 |
|end=38227035 | |end=38227035 | ||
| + | |end_of_center_position=38227029 | ||
|entrez_id=6461 | |entrez_id=6461 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| Line 15: | Line 17: | ||
|nearest_refseq=NM_003028 | |nearest_refseq=NM_003028 | ||
|nearest_unigene=Hs.521482 | |nearest_unigene=Hs.521482 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=38227021 | |start=38227021 | ||
| + | |start_of_center_position=38227028 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=MG828752 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100767.1 | |tss_id=hg_100767.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:27, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 38227028 |
|---|---|
| End of the center position in the TSS region: | 38227029 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | MG828752 |
|---|---|
| Distance: | -15 |
| Num_trans: | 1 |
| All_trans: | MG828752:-15 |
TATA-Box annotation
| Distance to TSS: | -157801 |
|---|---|
| Nearest PromoterID: | NM_003028 |
| Entrez ID: | 6461 |
| Nearest Unigene: | Hs.521482 |
| Nearest Refseq: | NM_003028 |
| Nearest Ensembl: | ENSG00000107338 |
| Gene Name: | SHB |
| Gene Alias: | bA3J10.2 |
| Gene Description: | SH2 domain containing adaptor protein B |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
