Difference between revisions of "TSS:Hg 102085.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=1884 |entrez_id=1318 |gc_percent=0.432836 |gene_alias=COPT2|CTR2|hCTR2 |gene_description=solute carrier family 31 member 2 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CTR2= | ||
| + | |all_trans=DQ582274:-91 | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss= | + | |distance=-91 |
| + | |distance_to_tss=1835 | ||
| + | |end=113152843 | ||
| + | |end_of_center_position=113152842 | ||
|entrez_id=1318 | |entrez_id=1318 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| − | |gene_alias=COPT2 | + | |gene_alias=COPT2{{!}}CTR2{{!}}hCTR2 |
|gene_description=solute carrier family 31 member 2 | |gene_description=solute carrier family 31 member 2 | ||
|gene_name=SLC31A2 | |gene_name=SLC31A2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCTR2= | ||
|nearest_ensembl=ENSG00000136867 | |nearest_ensembl=ENSG00000136867 | ||
|nearest_promoter_id=NM_001860 | |nearest_promoter_id=NM_001860 | ||
|nearest_refseq=NM_001860 | |nearest_refseq=NM_001860 | ||
|nearest_unigene=Hs.24030 | |nearest_unigene=Hs.24030 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=113152840 | ||
| + | |start_of_center_position=113152841 | ||
| + | |strand=- | ||
| + | |transcript_name=DQ582274 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102085.1 | |tss_id=hg_102085.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:55, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 113152841 |
|---|---|
| End of the center position in the TSS region: | 113152842 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | DQ582274 |
|---|---|
| Distance: | -91 |
| Num_trans: | 1 |
| All_trans: | DQ582274:-91 |
TATA-Box annotation
| Distance to TSS: | 1835 |
|---|---|
| Nearest PromoterID: | NM_001860 |
| Entrez ID: | 1318 |
| Nearest Unigene: | Hs.24030 |
| Nearest Refseq: | NM_001860 |
| Nearest Ensembl: | ENSG00000136867 |
| Gene Name: | SLC31A2 |
| Gene Alias: | COPT2|CTR2|hCTR2 |
| Gene Description: | solute carrier family 31 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
