Difference between revisions of "TSS:Hg 100785.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NR_002836:349 ENST00000613141.1 | + | |all_trans=NR_002836:349 ENST00000613141.1:357 BC007887:357 BC025351:357 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-358 | |distance_to_tss=-358 | ||
|end=41074992 | |end=41074992 | ||
| + | |end_of_center_position=41074983 | ||
|entrez_id=595135 | |entrez_id=595135 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| Line 14: | Line 15: | ||
|gene_source=HGNC:18965 | |gene_source=HGNC:18965 | ||
|gene_symbol=PGM5P2 | |gene_symbol=PGM5P2 | ||
| − | |gene_synonyms= | + | |gene_synonyms=AK096159 |
|gene_type=pseudo | |gene_type=pseudo | ||
|hgnc_mgi_id=HGNC:18965 | |hgnc_mgi_id=HGNC:18965 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_002836 | |nearest_refseq=NR_002836 | ||
|nearest_unigene=Hs.571593 | |nearest_unigene=Hs.571593 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=41074973 | |start=41074973 | ||
| + | |start_of_center_position=41074982 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NR_002836 | + | |transcript_name=NR_002836.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100785.1 | |tss_id=hg_100785.1 | ||
Latest revision as of 17:51, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 41074982 |
|---|---|
| End of the center position in the TSS region: | 41074983 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_002836.2 |
|---|---|
| Distance: | 349 |
| Num_trans: | 4 |
| All_trans: | NR_002836:349 ENST00000613141.1:357 BC007887:357 BC025351:357 |
TATA-Box annotation
| Distance to TSS: | -358 |
|---|---|
| Nearest PromoterID: | NR_002836 |
| Entrez ID: | 595135 |
| Nearest Unigene: | Hs.571593 |
| Nearest Refseq: | NR_002836 |
| Nearest Ensembl: | ENSG00000277778 |
| Gene Name: | phosphoglucomutase 5 pseudogene 2 |
| Gene Alias: | - |
| Gene Description: | phosphoglucomutase 5 pseudogene 2 |
| Gene Type: | pseudo |
| CpG%: | 0.065 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
