Difference between revisions of "TSS:Hg 100797.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NR_109769:8 ENST00000446290.1 | + | |all_trans=NR_109769:8 ENST00000446290.1:21 ENST00000432148.5:494 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-17 | |distance_to_tss=-17 | ||
|end=68546628 | |end=68546628 | ||
| + | |end_of_center_position=68546619 | ||
|entrez_id=101927015 | |entrez_id=101927015 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_109769 | |nearest_refseq=NR_109769 | ||
|nearest_unigene=Hs.406454 | |nearest_unigene=Hs.406454 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=68546609 | |start=68546609 | ||
| + | |start_of_center_position=68546618 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NR_109769 | + | |transcript_name=NR_109769.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100797.1 | |tss_id=hg_100797.1 | ||
Latest revision as of 17:51, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68546618 |
|---|---|
| End of the center position in the TSS region: | 68546619 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_109769.1 |
|---|---|
| Distance: | 8 |
| Num_trans: | 3 |
| All_trans: | NR_109769:8 ENST00000446290.1:21 ENST00000432148.5:494 |
TATA-Box annotation
| Distance to TSS: | -17 |
|---|---|
| Nearest PromoterID: | NR_109769 |
| Entrez ID: | 101927015 |
| Nearest Unigene: | Hs.406454 |
| Nearest Refseq: | NR_109769 |
| Nearest Ensembl: | ENSG00000234506 |
| Gene Name: | long intergenic non-protein coding RNA 1506 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1506 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
