Difference between revisions of "TSS:Hg 100830.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:48713 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=61 | |distance_to_tss=61 | ||
|end=69820695 | |end=69820695 | ||
| + | |end_of_center_position=69820678 | ||
|entrez_id=494558 | |entrez_id=494558 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=- | + | |gene_alias=C9orf135-AS1 |
| − | |gene_description=C9orf135 | + | |gene_description=C9orf135 divergent transcript |
|gene_id=494558 | |gene_id=494558 | ||
| − | |gene_name=C9orf135 | + | |gene_name=C9orf135 divergent transcript |
|gene_source=HGNC:48713 | |gene_source=HGNC:48713 | ||
| − | |gene_symbol=C9orf135- | + | |gene_symbol=C9orf135-DT |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:48713 | |hgnc_mgi_id=HGNC:48713 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000225626 |
|nearest_promoter_id=NR_038833 | |nearest_promoter_id=NR_038833 | ||
|nearest_refseq=NR_038833 | |nearest_refseq=NR_038833 | ||
|nearest_unigene=Hs.130722 | |nearest_unigene=Hs.130722 | ||
| − | |num_trans= | + | |num_trans=494558 |
|species=human | |species=human | ||
|start=69820660 | |start=69820660 | ||
| + | |start_of_center_position=69820677 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000453410.1 | + | |transcript_name=ENST00000662063.1 ENST00000453410.1 ENST00000652595.1 ENST00000526458.1 BC039385 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100830.1 | |tss_id=hg_100830.1 | ||
Latest revision as of 17:52, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69820677 |
|---|---|
| End of the center position in the TSS region: | 69820678 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000662063.1 ENST00000453410.1 ENST00000652595.1 ENST00000526458.1 BC039385 |
|---|---|
| Distance: | 0 |
| Num_trans: | 494558 |
| All_trans: | HGNC:48713 |
TATA-Box annotation
| Distance to TSS: | 61 |
|---|---|
| Nearest PromoterID: | NR_038833 |
| Entrez ID: | 494558 |
| Nearest Unigene: | Hs.130722 |
| Nearest Refseq: | NR_038833 |
| Nearest Ensembl: | ENSG00000225626 |
| Gene Name: | C9orf135 divergent transcript |
| Gene Alias: | C9orf135-AS1 |
| Gene Description: | C9orf135 divergent transcript |
| Gene Type: | ncRNA |
| CpG%: | 0.055 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
