Difference between revisions of "TSS:Hg 100850.1"
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{{TSSDetail | {{TSSDetail | ||
|BTEB1= | |BTEB1= | ||
| − | |all_trans=BC069431:246 AK313631:246 BC074879:271 BC074880:271 EU446889:316 AB464604:318 CU686806:319 AB451404:320 | + | |all_trans=LF345227:-70 MA580804:-70 LF345228:234 MA580805:234 BC069431:246 AK313631:246 BC074879:271 BC074880:271 LF345226:-306 MA580803:-306 EU446889:316 AB464604:318 CU686806:319 AB451404:320 LF213686:372 MA449263:372 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| − | |distance= | + | |distance=-70 |
|distance_to_tss=965 | |distance_to_tss=965 | ||
|end=70413701 | |end=70413701 | ||
| + | |end_of_center_position=70413692 | ||
|entrez_id=687 | |entrez_id=687 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=BTEB | + | |gene_alias=BTEB{{!}}BTEB1 |
|gene_description=Kruppel like factor 9 | |gene_description=Kruppel like factor 9 | ||
|gene_id=687 | |gene_id=687 | ||
| − | |gene_name= | + | |gene_name=KLF9 |
|gene_source=HGNC:1123 | |gene_source=HGNC:1123 | ||
|gene_symbol=KLF9 | |gene_symbol=KLF9 | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NM_001206 | |nearest_refseq=NM_001206 | ||
|nearest_unigene=Hs.150557 | |nearest_unigene=Hs.150557 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=70413682 | |start=70413682 | ||
| + | |start_of_center_position=70413691 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF345227 MA580804 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_100850.1 | |tss_id=hg_100850.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:52, 12 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70413691 |
|---|---|
| End of the center position in the TSS region: | 70413692 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF345227 MA580804 |
|---|---|
| Distance: | -70 |
| Num_trans: | 16 |
| All_trans: | LF345227:-70 MA580804:-70 LF345228:234 MA580805:234 BC069431:246 AK313631:246 BC074879:271 BC074880:271 LF345226:-306 MA580803:-306 EU446889:316 AB464604:318 CU686806:319 AB451404:320 LF213686:372 MA449263:372 |
TATA-Box annotation
| Distance to TSS: | 965 |
|---|---|
| Nearest PromoterID: | NM_001206 |
| Entrez ID: | 687 |
| Nearest Unigene: | Hs.150557 |
| Nearest Refseq: | NM_001206 |
| Nearest Ensembl: | ENSG00000119138 |
| Gene Name: | KLF9 |
| Gene Alias: | BTEB|BTEB1 |
| Gene Description: | Kruppel like factor 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
