Difference between revisions of "TSS:Hg 101049.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|C9orf65= | |C9orf65= | ||
|KIAA0367= | |KIAA0367= | ||
| − | |all_trans= | + | |all_trans=HGNC:25209 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 9: | Line 9: | ||
|distance_to_tss=276 | |distance_to_tss=276 | ||
|end=76692141 | |end=76692141 | ||
| + | |end_of_center_position=76692139 | ||
|entrez_id=158471 | |entrez_id=158471 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=BMCC1 | + | |gene_alias=BMCC1{{!}}BNIPXL{{!}}C9orf65{{!}}KIAA0367 |
| − | |gene_description=prune homolog 2 | + | |gene_description=prune homolog 2 with BCH domain |
|gene_id=158471 | |gene_id=158471 | ||
| − | |gene_name=prune homolog 2 | + | |gene_name=prune homolog 2 with BCH domain |
|gene_source=HGNC:25209 | |gene_source=HGNC:25209 | ||
|gene_symbol=PRUNE2 | |gene_symbol=PRUNE2 | ||
| Line 21: | Line 22: | ||
|hgnc_mgi_id=HGNC:25209 | |hgnc_mgi_id=HGNC:25209 | ||
|nearest_ensembl=ENSG00000106772 | |nearest_ensembl=ENSG00000106772 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001308049 |
|nearest_refseq=NM_015225 | |nearest_refseq=NM_015225 | ||
|nearest_unigene=Hs.262857 | |nearest_unigene=Hs.262857 | ||
| − | |num_trans= | + | |num_trans=158471 |
|species=human | |species=human | ||
|start=76692136 | |start=76692136 | ||
| + | |start_of_center_position=76692138 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000488346.5 | + | |transcript_name=ENST00000488346.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101049.1 | |tss_id=hg_101049.1 | ||
Latest revision as of 17:56, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 76692138 |
|---|---|
| End of the center position in the TSS region: | 76692139 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000488346.5 |
|---|---|
| Distance: | -26 |
| Num_trans: | 158471 |
| All_trans: | HGNC:25209 |
TATA-Box annotation
| Distance to TSS: | 276 |
|---|---|
| Nearest PromoterID: | NM_001308049 |
| Entrez ID: | 158471 |
| Nearest Unigene: | Hs.262857 |
| Nearest Refseq: | NM_015225 |
| Nearest Ensembl: | ENSG00000106772 |
| Gene Name: | prune homolog 2 with BCH domain |
| Gene Alias: | BMCC1|BNIPXL|C9orf65|KIAA0367 |
| Gene Description: | prune homolog 2 with BCH domain |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
