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Difference between revisions of "TSS:Hg 101180.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=NM_022127:245 AF305210:245
+
|all_trans=NM_022127:16 AF305210:245
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.005
 
|cpg_percent=0.005
|distance=245
+
|distance=16
|distance_to_tss=-249
+
|distance_to_tss=-20
 
|end=84368751
 
|end=84368751
 +
|end_of_center_position=84368747
 
|entrez_id=64078
 
|entrez_id=64078
 
|gc_percent=0.58209
 
|gc_percent=0.58209
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=84368742
 
|start=84368742
 +
|start_of_center_position=84368746
 
|strand=-
 
|strand=-
|transcript_name=NM_022127 AF305210
+
|transcript_name=NM_022127.3
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=hg_101180.1
 
|tss_id=hg_101180.1

Latest revision as of 17:59, 19 July 2021

Basic information about the TSS


TSS ID:hg_101180.1
Species:human
Chr:chr9
TSS Classification:no
Start:84368742
End:84368751
Strand:-
TSS Score:1
Start of the center position in the TSS region:84368746
End of the center position in the TSS region:84368747



Gene and protein annotation


Transcript_name:NM_022127.3
Distance:16
GeneID:64078
HGNC/MGI_ID:HGNC:16484
UniProt_ID:Q9HAS3
Gene_name:solute carrier family 28 member 3
Gene_symbol:SLC28A3
Gene_synonyms:CNT3
Gene_source:HGNC:16484



Transcript annotation


Transcript_name:NM_022127.3
Distance:16
Num_trans:2
All_trans:NM_022127:16 AF305210:245



TATA-Box annotation


Distance to TSS:-20
Nearest PromoterID:NM_022127
Entrez ID:64078
Nearest Unigene:Hs.535966
Nearest Refseq:NM_022127
Nearest Ensembl:ENSG00000197506
Gene Name:solute carrier family 28 member 3
Gene Alias:CNT3
Gene Description:solute carrier family 28 member 3
Gene Type:protein-coding
CpG%:0.005
GC%:0.58209
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):