Difference between revisions of "TSS:Hg 10001.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:10315 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=3275 | ||
| + | |end=6209399 | ||
| + | |end_of_center_position=6209394 | ||
|entrez_id=388591 | |entrez_id=388591 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=C1orf188 | |gene_alias=C1orf188 | ||
|gene_description=ring finger protein 207 | |gene_description=ring finger protein 207 | ||
| − | |gene_name= | + | |gene_id=6146 |
| + | |gene_name=ribosomal protein L22 | ||
| + | |gene_source=HGNC:10315 | ||
| + | |gene_symbol=RPL22 | ||
| + | |gene_synonyms=EAP L22 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10315 | ||
|nearest_ensembl=ENSG00000158286 | |nearest_ensembl=ENSG00000158286 | ||
|nearest_promoter_id=NM_207396 | |nearest_promoter_id=NM_207396 | ||
|nearest_refseq=NM_173795 | |nearest_refseq=NM_173795 | ||
|nearest_unigene=Hs.716549 | |nearest_unigene=Hs.716549 | ||
| + | |num_trans=6146 | ||
| + | |species=human | ||
| + | |start=6209388 | ||
| + | |start_of_center_position=6209393 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000465335.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10001.1 | |tss_id=hg_10001.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=K7EJT5 | ||
}} | }} | ||
Latest revision as of 17:34, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6209393 |
|---|---|
| End of the center position in the TSS region: | 6209394 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000465335.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6146 |
| All_trans: | HGNC:10315 |
TATA-Box annotation
| Distance to TSS: | 3275 |
|---|---|
| Nearest PromoterID: | NM_207396 |
| Entrez ID: | 388591 |
| Nearest Unigene: | Hs.716549 |
| Nearest Refseq: | NM_173795 |
| Nearest Ensembl: | ENSG00000158286 |
| Gene Name: | ribosomal protein L22 |
| Gene Alias: | C1orf188 |
| Gene Description: | ring finger protein 207 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
