Difference between revisions of "TSS:Hg 101381.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|NF-IL3A= | |NF-IL3A= | ||
|NFIL3A= | |NFIL3A= | ||
| − | |all_trans=ENST00000297689. | + | |all_trans=LP895627:0 ENST00000297689.4:18 NM_005384:18 S79880:170 X64318:170 U26173:170 AK313970:172 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.2 | |cpg_percent=0.2 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-39 |
|end=91423892 | |end=91423892 | ||
| + | |end_of_center_position=91423871 | ||
|entrez_id=4783 | |entrez_id=4783 | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
| − | |gene_alias=E4BP4 | + | |gene_alias=E4BP4{{!}}IL3BP1{{!}}NF-IL3A{{!}}NFIL3A |
| − | |gene_description= | + | |gene_description=nuclear factor, interleukin 3 regulated |
|gene_id=4783 | |gene_id=4783 | ||
| − | |gene_name= | + | |gene_name=NFIL3 |
|gene_source=HGNC:7787 | |gene_source=HGNC:7787 | ||
|gene_symbol=NFIL3 | |gene_symbol=NFIL3 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=91423849 | |start=91423849 | ||
| + | |start_of_center_position=91423870 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LP895627 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101381.1 | |tss_id=hg_101381.1 | ||
Latest revision as of 16:38, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 91423870 |
|---|---|
| End of the center position in the TSS region: | 91423871 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LP895627 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | LP895627:0 ENST00000297689.4:18 NM_005384:18 S79880:170 X64318:170 U26173:170 AK313970:172 |
TATA-Box annotation
| Distance to TSS: | -39 |
|---|---|
| Nearest PromoterID: | NM_005384 |
| Entrez ID: | 4783 |
| Nearest Unigene: | Hs.79334 |
| Nearest Refseq: | NM_005384 |
| Nearest Ensembl: | ENSG00000165030 |
| Gene Name: | NFIL3 |
| Gene Alias: | E4BP4|IL3BP1|NF-IL3A|NFIL3A |
| Gene Description: | nuclear factor, interleukin 3 regulated |
| Gene Type: | protein-coding |
| CpG%: | 0.2 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
