Difference between revisions of "TSS:Hg 101412.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:5330 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=49333 | |distance_to_tss=49333 | ||
|end=92243215 | |end=92243215 | ||
| + | |end_of_center_position=92243215 | ||
|entrez_id=100500918 | |entrez_id=100500918 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| Line 11: | Line 12: | ||
|gene_description=microRNA 3651 | |gene_description=microRNA 3651 | ||
|gene_id=3376 | |gene_id=3376 | ||
| − | |gene_name=isoleucyl-tRNA synthetase | + | |gene_name=isoleucyl-tRNA synthetase 1 |
|gene_source=HGNC:5330 | |gene_source=HGNC:5330 | ||
| − | |gene_symbol= | + | |gene_symbol=IARS1 |
| − | |gene_synonyms= | + | |gene_synonyms=ILRS |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:5330 | |hgnc_mgi_id=HGNC:5330 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_037424 | |nearest_refseq=NR_037424 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=3376 |
|species=human | |species=human | ||
|start=92243213 | |start=92243213 | ||
| + | |start_of_center_position=92243214 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000474340 | + | |transcript_name=ENST00000474340.1 AK057920 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101412.1 | |tss_id=hg_101412.1 | ||
Latest revision as of 18:04, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92243214 |
|---|---|
| End of the center position in the TSS region: | 92243215 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000474340.1 AK057920 |
|---|---|
| Distance: | -13 |
| Num_trans: | 3376 |
| All_trans: | HGNC:5330 |
TATA-Box annotation
| Distance to TSS: | 49333 |
|---|---|
| Nearest PromoterID: | NR_037424 |
| Entrez ID: | 100500918 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_037424 |
| Nearest Ensembl: | ENSG00000281156 |
| Gene Name: | isoleucyl-tRNA synthetase 1 |
| Gene Alias: | mir-3651 |
| Gene Description: | microRNA 3651 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
