Difference between revisions of "TSS:Hg 101414.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 5: | Line 5: | ||
|IRS= | |IRS= | ||
|PRO0785= | |PRO0785= | ||
| − | |all_trans= | + | |all_trans=HGNC:5330 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 11: | Line 11: | ||
|distance_to_tss=58 | |distance_to_tss=58 | ||
|end=92293722 | |end=92293722 | ||
| + | |end_of_center_position=92293699 | ||
|entrez_id=3376 | |entrez_id=3376 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=GRIDHH | + | |gene_alias=GRIDHH{{!}}IARS1{{!}}ILERS{{!}}ILRS{{!}}IRS{{!}}PRO0785 |
|gene_description=isoleucyl-tRNA synthetase | |gene_description=isoleucyl-tRNA synthetase | ||
|gene_id=3376 | |gene_id=3376 | ||
| − | |gene_name=isoleucyl-tRNA synthetase | + | |gene_name=isoleucyl-tRNA synthetase 1 |
|gene_source=HGNC:5330 | |gene_source=HGNC:5330 | ||
| − | |gene_symbol= | + | |gene_symbol=IARS1 |
| − | |gene_synonyms= | + | |gene_synonyms=ILRS |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:5330 | |hgnc_mgi_id=HGNC:5330 | ||
| Line 26: | Line 27: | ||
|nearest_refseq=NM_002161 | |nearest_refseq=NM_002161 | ||
|nearest_unigene=Hs.445403 | |nearest_unigene=Hs.445403 | ||
| − | |num_trans= | + | |num_trans=3376 |
|species=human | |species=human | ||
|start=92293674 | |start=92293674 | ||
| + | |start_of_center_position=92293698 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000375643.7 | + | |transcript_name=ENST00000443024.7 ENST00000375643.7 ENST00000627121.3 ENST00000490438.1 BX647236 BX647430 BX537417 BX647071 BX648567 AK293014 U04953 AK301272 BX537429 BX538109 AK308202 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101414.1 | |tss_id=hg_101414.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A0A0MSX9 B4DVX2 | + | |uniprot_id=A0A0A0MSX9 B4DVX2 P41252 Q5TCC6 Q7L4K8 Q7Z355 Q7Z3U5 |
}} | }} | ||
Latest revision as of 18:04, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92293698 |
|---|---|
| End of the center position in the TSS region: | 92293699 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000443024.7 ENST00000375643.7 ENST00000627121.3 ENST00000490438.1 BX647236 BX647430 BX537417 BX647071 BX648567 AK293014 U04953 AK301272 BX537429 BX538109 AK308202 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3376 |
| All_trans: | HGNC:5330 |
TATA-Box annotation
| Distance to TSS: | 58 |
|---|---|
| Nearest PromoterID: | NM_013417 |
| Entrez ID: | 3376 |
| Nearest Unigene: | Hs.445403 |
| Nearest Refseq: | NM_002161 |
| Nearest Ensembl: | ENSG00000196305 |
| Gene Name: | isoleucyl-tRNA synthetase 1 |
| Gene Alias: | GRIDHH|IARS1|ILERS|ILRS|IRS|PRO0785 |
| Gene Description: | isoleucyl-tRNA synthetase |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
