Difference between revisions of "TSS:Hg 101417.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:23387 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=92325376 | |end=92325376 | ||
| − | |entrez_id= | + | |end_of_center_position=92325350 |
| + | |entrez_id=55035 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias= | + | |gene_alias=C9orf34{{!}}NOP132{{!}}bA62C3.3{{!}}bA62C3.4 |
| − | |gene_description= | + | |gene_description=nucleolar protein 8 |
|gene_id=55035 | |gene_id=55035 | ||
|gene_name=nucleolar protein 8 | |gene_name=nucleolar protein 8 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:23387 | |hgnc_mgi_id=HGNC:23387 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000198000 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_017948 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_017948 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.442199 |
| − | |num_trans= | + | |num_trans=55035 |
|species=human | |species=human | ||
|start=92325322 | |start=92325322 | ||
| + | |start_of_center_position=92325349 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000536593.5 ENST00000545558.5 ENST00000544867.5 ENST00000542053.5 ENST00000432670.6 ENST00000434228.5 ENST00000433029.6 ENST00000542613.5 ENST00000542573.5 ENST00000543260.5 ENST00000543985.5 ENST00000544321.5 ENST00000538215.5 ENST00000535649 | + | |transcript_name=ENST00000442668.7 ENST00000536593.5 ENST00000545558.5 ENST00000544867.5 ENST00000542053.5 ENST00000432670.6 ENST00000434228.5 ENST00000433029.6 ENST00000542613.5 ENST00000542573.5 ENST00000543260.5 ENST00000543985.5 ENST00000544321.5 ENST00000538215.5 ENST00000535649.1 BC146810 CR627363 AK307408 AK297355 BC008491 AK001049 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101417.1 | |tss_id=hg_101417.1 | ||
Latest revision as of 18:04, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92325349 |
|---|---|
| End of the center position in the TSS region: | 92325350 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000442668.7 ENST00000536593.5 ENST00000545558.5 ENST00000544867.5 ENST00000542053.5 ENST00000432670.6 ENST00000434228.5 ENST00000433029.6 ENST00000542613.5 ENST00000542573.5 ENST00000543260.5 ENST00000543985.5 ENST00000544321.5 ENST00000538215.5 ENST00000535649.1 BC146810 CR627363 AK307408 AK297355 BC008491 AK001049 |
|---|---|
| Distance: | 0 |
| Num_trans: | 55035 |
| All_trans: | HGNC:23387 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_017948 |
| Entrez ID: | 55035 |
| Nearest Unigene: | Hs.442199 |
| Nearest Refseq: | NM_017948 |
| Nearest Ensembl: | ENSG00000198000 |
| Gene Name: | nucleolar protein 8 |
| Gene Alias: | C9orf34|NOP132|bA62C3.3|bA62C3.4 |
| Gene Description: | nucleolar protein 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
