Difference between revisions of "TSS:Hg 101452.1"
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF331591:261 MA567168:261 | ||
|bA526D8.1= | |bA526D8.1= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=261 |
| − | |distance_to_tss= | + | |distance_to_tss=35490 |
|end=92729356 | |end=92729356 | ||
| + | |end_of_center_position=92729343 | ||
|entrez_id=23299 | |entrez_id=23299 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=SMALED2 | + | |gene_alias=SMALED2{{!}}SMALED2A{{!}}SMALED2B{{!}}bA526D8.1 |
|gene_description=BICD cargo adaptor 2 | |gene_description=BICD cargo adaptor 2 | ||
|gene_name=BICD2 | |gene_name=BICD2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000185963 | |nearest_ensembl=ENSG00000185963 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001003800 |
|nearest_refseq=NM_015250 | |nearest_refseq=NM_015250 | ||
|nearest_unigene=Hs.436939 | |nearest_unigene=Hs.436939 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=92729329 | |start=92729329 | ||
| + | |start_of_center_position=92729342 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF331591 MA567168 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101452.1 | |tss_id=hg_101452.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:40, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 92729342 |
|---|---|
| End of the center position in the TSS region: | 92729343 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF331591 MA567168 |
|---|---|
| Distance: | 261 |
| Num_trans: | 2 |
| All_trans: | LF331591:261 MA567168:261 |
TATA-Box annotation
| Distance to TSS: | 35490 |
|---|---|
| Nearest PromoterID: | NM_001003800 |
| Entrez ID: | 23299 |
| Nearest Unigene: | Hs.436939 |
| Nearest Refseq: | NM_015250 |
| Nearest Ensembl: | ENSG00000185963 |
| Gene Name: | BICD2 |
| Gene Alias: | SMALED2|SMALED2A|SMALED2B|bA526D8.1 |
| Gene Description: | BICD cargo adaptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
