Difference between revisions of "TSS:Hg 102176.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=6203 |entrez_id=9966 |gc_percent=0.422886 |gene_alias=TL1|TL1A|TNLG1B|VEGI|VEGI192A |gene_description=tumor necrosis factor sup...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TL1A= | ||
| + | |TNLG1B= | ||
| + | |VEGI= | ||
| + | |VEGI192A= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=NA | ||
|distance_to_tss=6203 | |distance_to_tss=6203 | ||
| + | |end=114786332 | ||
| + | |end_of_center_position=114786327 | ||
|entrez_id=9966 | |entrez_id=9966 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=TL1 | + | |gene_alias=TL1{{!}}TL1A{{!}}TNLG1B{{!}}VEGI{{!}}VEGI192A |
| − | |gene_description= | + | |gene_description=TNF superfamily member 15 |
|gene_name=TNFSF15 | |gene_name=TNFSF15 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_005118 | |nearest_refseq=NM_005118 | ||
|nearest_unigene=Hs.23349 | |nearest_unigene=Hs.23349 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=114786321 | ||
| + | |start_of_center_position=114786326 | ||
| + | |strand=- | ||
| + | |tata_box=34(TACCTTAAAAAC,-,0.00),36(CCTTAAAAACAC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102176.1 | |tss_id=hg_102176.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:57, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 114786326 |
|---|---|
| End of the center position in the TSS region: | 114786327 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 6203 |
|---|---|
| Nearest PromoterID: | NM_001204344 |
| Entrez ID: | 9966 |
| Nearest Unigene: | Hs.23349 |
| Nearest Refseq: | NM_005118 |
| Nearest Ensembl: | ENSG00000181634 |
| Gene Name: | TNFSF15 |
| Gene Alias: | TL1|TL1A|TNLG1B|VEGI|VEGI192A |
| Gene Description: | TNF superfamily member 15 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 34(TACCTTAAAAAC,-,0.00),36(CCTTAAAAACAC,+,0.00) |
