Difference between revisions of "TSS:Hg 101679.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|PARIS1= | |PARIS1= | ||
|TBC1D2A= | |TBC1D2A= | ||
| − | |all_trans= | + | |all_trans=HGNC:18026 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=-25 | |distance=-25 | ||
| − | |distance_to_tss= | + | |distance_to_tss=289 |
|end=98255367 | |end=98255367 | ||
| + | |end_of_center_position=98255360 | ||
|entrez_id=55357 | |entrez_id=55357 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=PARIS-1 | + | |gene_alias=PARIS-1{{!}}PARIS1{{!}}TBC1D2A |
|gene_description=TBC1 domain family member 2 | |gene_description=TBC1 domain family member 2 | ||
|gene_id=55357 | |gene_id=55357 | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:18026 | |hgnc_mgi_id=HGNC:18026 | ||
|nearest_ensembl=ENSG00000095383 | |nearest_ensembl=ENSG00000095383 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_051978 |
|nearest_refseq=NM_018421 | |nearest_refseq=NM_018421 | ||
|nearest_unigene=Hs.371016 | |nearest_unigene=Hs.371016 | ||
| − | |num_trans= | + | |num_trans=55357 |
|species=human | |species=human | ||
|start=98255352 | |start=98255352 | ||
| + | |start_of_center_position=98255359 | ||
|strand=- | |strand=- | ||
|transcript_name=AK298575 | |transcript_name=AK298575 | ||
Latest revision as of 18:10, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 98255359 |
|---|---|
| End of the center position in the TSS region: | 98255360 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK298575 |
|---|---|
| Distance: | -25 |
| Num_trans: | 55357 |
| All_trans: | HGNC:18026 |
TATA-Box annotation
| Distance to TSS: | 289 |
|---|---|
| Nearest PromoterID: | NR_051978 |
| Entrez ID: | 55357 |
| Nearest Unigene: | Hs.371016 |
| Nearest Refseq: | NM_018421 |
| Nearest Ensembl: | ENSG00000095383 |
| Gene Name: | TBC1 domain family member 2 |
| Gene Alias: | PARIS-1|PARIS1|TBC1D2A |
| Gene Description: | TBC1 domain family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
