Difference between revisions of "TSS:Hg 101927.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|TRX6= | |TRX6= | ||
| − | |all_trans= | + | |all_trans=HGNC:31454 |
|bA427L11.2= | |bA427L11.2= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=110337867 | |end=110337867 | ||
| + | |end_of_center_position=110337863 | ||
|entrez_id=255220 | |entrez_id=255220 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
| − | |gene_alias=SPTRX-3 | + | |gene_alias=SPTRX-3{{!}}SPTRX3{{!}}TRX6{{!}}bA427L11.2 |
|gene_description=thioredoxin domain containing 8 | |gene_description=thioredoxin domain containing 8 | ||
|gene_id=255220 | |gene_id=255220 | ||
| − | |gene_name=thioredoxin domain containing 8 | + | |gene_name=thioredoxin domain containing 8 |
|gene_source=HGNC:31454 | |gene_source=HGNC:31454 | ||
|gene_symbol=TXNDC8 | |gene_symbol=TXNDC8 | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:31454 | |hgnc_mgi_id=HGNC:31454 | ||
|nearest_ensembl=ENSG00000204193 | |nearest_ensembl=ENSG00000204193 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001364963 |
|nearest_refseq=NM_001003936 | |nearest_refseq=NM_001003936 | ||
|nearest_unigene=Hs.147064 | |nearest_unigene=Hs.147064 | ||
| − | |num_trans= | + | |num_trans=255220 |
|species=human | |species=human | ||
|start=110337857 | |start=110337857 | ||
| + | |start_of_center_position=110337862 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000423740.7 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101927.1 | |tss_id=hg_101927.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B7ZME0 Q6A555 |
}} | }} | ||
Latest revision as of 18:15, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 110337862 |
|---|---|
| End of the center position in the TSS region: | 110337863 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000423740.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 255220 |
| All_trans: | HGNC:31454 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001364963 |
| Entrez ID: | 255220 |
| Nearest Unigene: | Hs.147064 |
| Nearest Refseq: | NM_001003936 |
| Nearest Ensembl: | ENSG00000204193 |
| Gene Name: | thioredoxin domain containing 8 |
| Gene Alias: | SPTRX-3|SPTRX3|TRX6|bA427L11.2 |
| Gene Description: | thioredoxin domain containing 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
