Difference between revisions of "TSS:Hg 101961.1"
From referenceTSS
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| Line 5: | Line 5: | ||
|Mrec1.3= | |Mrec1.3= | ||
|VZG1= | |VZG1= | ||
| + | |all_trans=NM_001351419:-183 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=-183 |
| − | |distance_to_tss= | + | |distance_to_tss=186 |
|edg-2= | |edg-2= | ||
|end=111037446 | |end=111037446 | ||
| + | |end_of_center_position=111037444 | ||
|entrez_id=1902 | |entrez_id=1902 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=EDG2 | + | |gene_alias=EDG2{{!}}GPR26{{!}}Gpcr26{{!}}LPA1{{!}}Mrec1.3{{!}}VZG1{{!}}edg-2{{!}}rec.1.3{{!}}vzg-1 |
|gene_description=lysophosphatidic acid receptor 1 | |gene_description=lysophosphatidic acid receptor 1 | ||
| − | |gene_name=LPAR1 | + | |gene_id=1902 |
| + | |gene_name=lysophosphatidic acid receptor 1 | ||
| + | |gene_source=HGNC:3166 | ||
| + | |gene_symbol=LPAR1 | ||
| + | |gene_synonyms=Gpcr26 LPA1 Mrec1.3 edg-2 rec.1.3 vzg-1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3166 | ||
|nearest_ensembl=ENSG00000198121 | |nearest_ensembl=ENSG00000198121 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351419 |
|nearest_refseq=NM_001401 | |nearest_refseq=NM_001401 | ||
|nearest_unigene=Hs.126667 | |nearest_unigene=Hs.126667 | ||
| − | |num_trans= | + | |num_trans=1 |
|rec.1.3= | |rec.1.3= | ||
|species=human | |species=human | ||
|start=111037440 | |start=111037440 | ||
| + | |start_of_center_position=111037443 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001351419.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101961.1 | |tss_id=hg_101961.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
|vzg-1= | |vzg-1= | ||
}} | }} | ||
Latest revision as of 18:16, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 111037443 |
|---|---|
| End of the center position in the TSS region: | 111037444 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001351419.2 |
|---|---|
| Distance: | -183 |
| Num_trans: | 1 |
| All_trans: | NM_001351419:-183 |
TATA-Box annotation
| Distance to TSS: | 186 |
|---|---|
| Nearest PromoterID: | NM_001351419 |
| Entrez ID: | 1902 |
| Nearest Unigene: | Hs.126667 |
| Nearest Refseq: | NM_001401 |
| Nearest Ensembl: | ENSG00000198121 |
| Gene Name: | lysophosphatidic acid receptor 1 |
| Gene Alias: | EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 |
| Gene Description: | lysophosphatidic acid receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
