Difference between revisions of "TSS:Hg 102208.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-90238 |entrez_id=944 |gc_percent=0.378109 |gene_alias=CD153|CD30L|CD30LG|TNLG3A |gene_description=tumor necrosis factor superfa...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CD30L= | ||
| + | |CD30LG= | ||
| + | |TNLG3A= | ||
| + | |all_trans=LF355050:0 MA590627:0 LF355049:71 MA590626:71 LF355051:-95 MA590628:-95 LF355052:-178 MA590629:-178 LF355048:185 MA590625:185 LF355053:-340 MA590630:-340 LF355054:-404 MA590631:-404 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=0 | ||
|distance_to_tss=-90238 | |distance_to_tss=-90238 | ||
| + | |end=115020853 | ||
| + | |end_of_center_position=115020833 | ||
|entrez_id=944 | |entrez_id=944 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| − | |gene_alias=CD153 | + | |gene_alias=CD153{{!}}CD30L{{!}}CD30LG{{!}}TNLG3A |
| − | |gene_description= | + | |gene_description=TNF superfamily member 8 |
|gene_name=TNFSF8 | |gene_name=TNFSF8 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_001244 | |nearest_refseq=NM_001244 | ||
|nearest_unigene=Hs.494901 | |nearest_unigene=Hs.494901 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=115020812 | ||
| + | |start_of_center_position=115020832 | ||
| + | |strand=- | ||
| + | |transcript_name=LF355050 MA590627 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102208.1 | |tss_id=hg_102208.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:58, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 115020832 |
|---|---|
| End of the center position in the TSS region: | 115020833 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF355050 MA590627 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | LF355050:0 MA590627:0 LF355049:71 MA590626:71 LF355051:-95 MA590628:-95 LF355052:-178 MA590629:-178 LF355048:185 MA590625:185 LF355053:-340 MA590630:-340 LF355054:-404 MA590631:-404 |
TATA-Box annotation
| Distance to TSS: | -90238 |
|---|---|
| Nearest PromoterID: | NM_001252290 |
| Entrez ID: | 944 |
| Nearest Unigene: | Hs.494901 |
| Nearest Refseq: | NM_001244 |
| Nearest Ensembl: | ENSG00000106952 |
| Gene Name: | TNFSF8 |
| Gene Alias: | CD153|CD30L|CD30LG|TNLG3A |
| Gene Description: | TNF superfamily member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
