Difference between revisions of "TSS:Hg 102251.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:17021 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-23 | |distance_to_tss=-23 | ||
|end=116687271 | |end=116687271 | ||
| + | |end_of_center_position=116687238 | ||
|entrez_id=23245 | |entrez_id=23245 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_014010 | |nearest_refseq=NM_014010 | ||
|nearest_unigene=Hs.601562 | |nearest_unigene=Hs.601562 | ||
| − | |num_trans= | + | |num_trans=23245 |
|species=human | |species=human | ||
|start=116687204 | |start=116687204 | ||
| + | |start_of_center_position=116687237 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000288520.9 ENST00000341734.8 ENST00000358637.4 | + | |transcript_name=ENST00000288520.9 ENST00000341734.8 ENST00000358637.4 BC029272 AK024064 BC010680 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_102251.1 | |tss_id=hg_102251.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=B3KN99 B7ZKP4 B7ZKP5 O75129 X6R5P2 | |uniprot_id=B3KN99 B7ZKP4 B7ZKP5 O75129 X6R5P2 | ||
}} | }} | ||
Latest revision as of 18:23, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116687237 |
|---|---|
| End of the center position in the TSS region: | 116687238 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000288520.9 ENST00000341734.8 ENST00000358637.4 BC029272 AK024064 BC010680 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23245 |
| All_trans: | HGNC:17021 |
TATA-Box annotation
| Distance to TSS: | -23 |
|---|---|
| Nearest PromoterID: | NM_198186 |
| Entrez ID: | 23245 |
| Nearest Unigene: | Hs.601562 |
| Nearest Refseq: | NM_014010 |
| Nearest Ensembl: | ENSG00000148219 |
| Gene Name: | astrotactin 2 |
| Gene Alias: | bA67K19.1 |
| Gene Description: | astrotactin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
