Difference between revisions of "TSS:Hg 102240.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |EST-YD1= | ||
| + | |all_trans=HGNC:23367 | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss=- | + | |distance=348 |
| + | |distance_to_tss=-357 | ||
| + | |end=115925573 | ||
| + | |end_of_center_position=115925564 | ||
|entrez_id=58483 | |entrez_id=58483 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=C9orf27 | + | |gene_alias=C9orf27{{!}}EST-YD1 |
|gene_description=long intergenic non-protein coding RNA 474 | |gene_description=long intergenic non-protein coding RNA 474 | ||
| − | |gene_name=LINC00474 | + | |gene_id=58483 |
| + | |gene_name=long intergenic non-protein coding RNA 474 | ||
| + | |gene_source=HGNC:23367 | ||
| + | |gene_symbol=LINC00474 | ||
| + | |gene_synonyms=EST-YD1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:23367 |
| + | |nearest_ensembl=ENSG00000204148 | ||
|nearest_promoter_id=NR_024032 | |nearest_promoter_id=NR_024032 | ||
| − | |nearest_refseq= | + | |nearest_refseq=NR_024032 |
|nearest_unigene=Hs.23367 | |nearest_unigene=Hs.23367 | ||
| + | |num_trans=58483 | ||
| + | |species=human | ||
| + | |start=115925554 | ||
| + | |start_of_center_position=115925563 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000374014.3 AB021923 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102240.1 | |tss_id=hg_102240.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:22, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 115925563 |
|---|---|
| End of the center position in the TSS region: | 115925564 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000374014.3 AB021923 |
|---|---|
| Distance: | 348 |
| Num_trans: | 58483 |
| All_trans: | HGNC:23367 |
TATA-Box annotation
| Distance to TSS: | -357 |
|---|---|
| Nearest PromoterID: | NR_024032 |
| Entrez ID: | 58483 |
| Nearest Unigene: | Hs.23367 |
| Nearest Refseq: | NR_024032 |
| Nearest Ensembl: | ENSG00000204148 |
| Gene Name: | long intergenic non-protein coding RNA 474 |
| Gene Alias: | C9orf27|EST-YD1 |
| Gene Description: | long intergenic non-protein coding RNA 474 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
