Difference between revisions of "TSS:Hg 102398.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:8770 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=9 |
|end=122828619 | |end=122828619 | ||
| + | |end_of_center_position=122828580 | ||
|entrez_id=5082 | |entrez_id=5082 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_005388 | |nearest_refseq=NM_005388 | ||
|nearest_unigene=Hs.271749 | |nearest_unigene=Hs.271749 | ||
| − | |num_trans= | + | |num_trans=5082 |
|species=human | |species=human | ||
|start=122828539 | |start=122828539 | ||
| + | |start_of_center_position=122828579 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AL117602 | + | |transcript_name=ENST00000259467.9 AL117602 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102398.1 | |tss_id=hg_102398.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q13371 |
}} | }} | ||
Latest revision as of 18:26, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 122828579 |
|---|---|
| End of the center position in the TSS region: | 122828580 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000259467.9 AL117602 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5082 |
| All_trans: | HGNC:8770 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NM_005388 |
| Entrez ID: | 5082 |
| Nearest Unigene: | Hs.271749 |
| Nearest Refseq: | NM_005388 |
| Nearest Ensembl: | ENSG00000136940 |
| Gene Name: | phosducin like |
| Gene Alias: | PhLP |
| Gene Description: | phosducin like |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
