Difference between revisions of "TSS:Mm 125971.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Gm10345= |
| + | |MA-nSMase= | ||
| + | |all_trans=MGI:3709877 | ||
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance= | + | |distance=-10 |
| − | |distance_to_tss=- | + | |distance_to_tss=-3 |
|end=76294380 | |end=76294380 | ||
| + | |end_of_center_position=76294369 | ||
|entrez_id=100503915 | |entrez_id=100503915 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias= | + | |gene_alias=Gm10345{{!}}MA-nSMase |
|gene_description=sphingomyelin phosphodiesterase 5 | |gene_description=sphingomyelin phosphodiesterase 5 | ||
|gene_id=100503915 | |gene_id=100503915 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_001195537 | |nearest_refseq=NM_001195537 | ||
|nearest_unigene=Mm.393455 | |nearest_unigene=Mm.393455 | ||
| − | |num_trans= | + | |num_trans=100503915 |
|species=mouse | |species=mouse | ||
|start=76294357 | |start=76294357 | ||
| + | |start_of_center_position=76294368 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000163991. | + | |transcript_name=ENSMUST00000163991.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_125971.1 | |tss_id=mm_125971.1 | ||
Latest revision as of 19:58, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 76294368 |
|---|---|
| End of the center position in the TSS region: | 76294369 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000163991.3 |
|---|---|
| Distance: | -10 |
| Num_trans: | 100503915 |
| All_trans: | MGI:3709877 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_001195537 |
| Entrez ID: | 100503915 |
| Nearest Unigene: | Mm.393455 |
| Nearest Refseq: | NM_001195537 |
| Nearest Ensembl: | ENSMUSG00000071724 |
| Gene Name: | sphingomyelin phosphodiesterase 5 |
| Gene Alias: | Gm10345|MA-nSMase |
| Gene Description: | sphingomyelin phosphodiesterase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
