Difference between revisions of "TSS:Hg 102289.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=104711 |entrez_id=55755 |gc_percent=0.502488 |gene_alias=C48|Cep215|MCPH3 |gene_description=CDK5 regulatory subunit associated...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Cep215= | ||
| + | |MCPH3= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=104708 | ||
| + | |end=120475493 | ||
| + | |end_of_center_position=120475460 | ||
|entrez_id=55755 | |entrez_id=55755 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=C48 | + | |gene_alias=C48{{!}}Cep215{{!}}MCPH3 |
|gene_description=CDK5 regulatory subunit associated protein 2 | |gene_description=CDK5 regulatory subunit associated protein 2 | ||
|gene_name=CDK5RAP2 | |gene_name=CDK5RAP2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000136861 | |nearest_ensembl=ENSG00000136861 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_073557 |
|nearest_refseq=NM_018249 | |nearest_refseq=NM_018249 | ||
|nearest_unigene=Hs.269560 | |nearest_unigene=Hs.269560 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=120475425 | ||
| + | |start_of_center_position=120475459 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102289.1 | |tss_id=hg_102289.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:00, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120475459 |
|---|---|
| End of the center position in the TSS region: | 120475460 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 104708 |
|---|---|
| Nearest PromoterID: | NR_073557 |
| Entrez ID: | 55755 |
| Nearest Unigene: | Hs.269560 |
| Nearest Refseq: | NM_018249 |
| Nearest Ensembl: | ENSG00000136861 |
| Gene Name: | CDK5RAP2 |
| Gene Alias: | C48|Cep215|MCPH3 |
| Gene Description: | CDK5 regulatory subunit associated protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
