Difference between revisions of "TSS:Mm 1265.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000184516.1:-478 |chr=chr1 |cpg_percent=0.01 |distance=-478 |distance_to_tss=-553 |end=63178480 |entrez_id=100217464 |gc_percent=0.462687 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:5530772 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-553 | |distance_to_tss=-553 | ||
|end=63178480 | |end=63178480 | ||
| + | |end_of_center_position=63178471 | ||
|entrez_id=100217464 | |entrez_id=100217464 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=MBI-83 | |gene_alias=MBI-83 | ||
| − | |gene_description= | + | |gene_description=small nucleolar RNA, H/ACA box 41 |
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=predicted gene, 27390 |
|gene_source=MGI:5530772 | |gene_source=MGI:5530772 | ||
|gene_symbol=Gm27390 | |gene_symbol=Gm27390 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_028558 | |nearest_refseq=NR_028558 | ||
|nearest_unigene=Mm.484706 | |nearest_unigene=Mm.484706 | ||
| − | |num_trans= | + | |num_trans= |
|species=mouse | |species=mouse | ||
|start=63178460 | |start=63178460 | ||
| + | |start_of_center_position=63178470 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-84(GCCTAGAAAGGG,-,0.00) |
|transcript_name=ENSMUST00000184516.1 | |transcript_name=ENSMUST00000184516.1 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 20:09, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 63178470 |
|---|---|
| End of the center position in the TSS region: | 63178471 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000184516.1 |
|---|---|
| Distance: | -478 |
| Num_trans: | |
| All_trans: | MGI:5530772 |
TATA-Box annotation
| Distance to TSS: | -553 |
|---|---|
| Nearest PromoterID: | NR_028558 |
| Entrez ID: | 100217464 |
| Nearest Unigene: | Mm.484706 |
| Nearest Refseq: | NR_028558 |
| Nearest Ensembl: | ENSMUSG00000064602 |
| Gene Name: | predicted gene, 27390 |
| Gene Alias: | MBI-83 |
| Gene Description: | small nucleolar RNA, H/ACA box 41 |
| Gene Type: | snoRNA |
| CpG%: | 0.01 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -84(GCCTAGAAAGGG,-,0.00) |
