Difference between revisions of "TSS:Hg 102942.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|RGF= | |RGF= | ||
|RalGEF= | |RalGEF= | ||
| − | |all_trans= | + | |all_trans=HGNC:9842 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=86 |
|end=133121157 | |end=133121157 | ||
| + | |end_of_center_position=133121154 | ||
|entrez_id=5900 | |entrez_id=5900 | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
| − | |gene_alias=RGDS | + | |gene_alias=RGDS{{!}}RGF{{!}}RalGEF |
|gene_description=ral guanine nucleotide dissociation stimulator | |gene_description=ral guanine nucleotide dissociation stimulator | ||
|gene_id=5900 | |gene_id=5900 | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:9842 | |hgnc_mgi_id=HGNC:9842 | ||
|nearest_ensembl=ENSG00000160271 | |nearest_ensembl=ENSG00000160271 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001271776 |
|nearest_refseq=NM_006266 | |nearest_refseq=NM_006266 | ||
|nearest_unigene=Hs.106185 | |nearest_unigene=Hs.106185 | ||
| − | |num_trans= | + | |num_trans=5900 |
|species=human | |species=human | ||
|start=133121150 | |start=133121150 | ||
| + | |start_of_center_position=133121153 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000493438 | + | |transcript_name=ENST00000493438.5 AK074114 GQ129266 GQ129265 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102942.1 | |tss_id=hg_102942.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:38, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 133121153 |
|---|---|
| End of the center position in the TSS region: | 133121154 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000493438.5 AK074114 GQ129266 GQ129265 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5900 |
| All_trans: | HGNC:9842 |
TATA-Box annotation
| Distance to TSS: | 86 |
|---|---|
| Nearest PromoterID: | NM_001271776 |
| Entrez ID: | 5900 |
| Nearest Unigene: | Hs.106185 |
| Nearest Refseq: | NM_006266 |
| Nearest Ensembl: | ENSG00000160271 |
| Gene Name: | ral guanine nucleotide dissociation stimulator |
| Gene Alias: | RGDS|RGF|RalGEF |
| Gene Description: | ral guanine nucleotide dissociation stimulator |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
